Nitrospira defluvii: NIDE2103
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Entry
NIDE2103 CDS
T01281
Symbol
cobA_hemD
Name
(GenBank) Uroporphyrinogen-III C-methyltransferase and Uroporphyrinogen-III synthase (modular protein)
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
nde
Nitrospira defluvii
Pathway
nde00860
Porphyrin metabolism
nde01100
Metabolic pathways
nde01110
Biosynthesis of secondary metabolites
nde01120
Microbial metabolism in diverse environments
nde01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NIDE2103 (cobA_hemD)
Enzymes [BR:
nde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
NIDE2103 (cobA_hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
NIDE2103 (cobA_hemD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TP_methylase
HEM4
Nitro_FeMo-Co
Motif
Other DBs
NCBI-ProteinID:
CBK41823
UniProt:
D8PF14
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All DBs
Position
2015207..2016676
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AA seq
489 aa
AA seq
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MDNGPGKGMVYLVGAGPGDPGLLTVRARELLRAADVVAYDELVSPAILSLIEPAVELLPV
GRRHGSGATSYRLHPLVLERAKAGCTVVRLKAGDPLIFGRGGEEAEDLAGAGIPFAIVPG
ISAALGAAAYAGIPLTHRSHTSEVTFLSGHDIHGRHQSQTIVPGAVAGKGTLVLFMAART
LGANLQRVMLAGRDADTPAAYIAAATTPKQTVIVGTLGTLHTLTAAVDPATPALVMIGDV
VGVRERIAWFERAPLAGRRLLCARARPGRSAIAAELRALGAEVLEIPEVVAEPLYGEPTM
DAALARVHEFHGMIFGCAAGVDAVIPRIPVFTVPVIAVGVEAAQALSRHGIEPVARVRGA
CEEALREHARLLKDQGFLLVTSEAGRPNLRAELARIGATIEALAAYRYSHRMPLMPLPPI
DLVVLPSSSAARAVLSGDVGQAIRTVPMIAIGPRTEAEARHYGAQQVVQAEHDTSAALVA
LAVSLVGAV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgggccgggaaaaggcatggtctatttagtcggcgcgggaccgggcgaccca
gggctgctcactgttcgcgcgcgggaattgctgcgtgcggccgacgtcgtggcctacgat
gaattggtttcgcctgcgatcctttcactcatcgagccagcggtcgagctgttgcccgtg
gggcggcgccatggcagcggagccacgtcctatcgattgcatccgctggtgctggaacgg
gccaaagctgggtgcacggttgtccgcttaaaggctggcgatccgctgatctttgggcga
ggcggtgaagaagctgaggacctcgcgggggcaggcatcccgtttgccattgttcccggc
atctccgcggctctcggggcggctgcctatgccggtattccgctcactcatcggtcacat
acttctgaggtcacgtttttgagcggacacgatatacatgggcgtcatcagagtcagacc
attgtgcctggagcggtcgccggcaagggtacgctcgtgctgttcatggccgcgcgaaca
ttgggcgcgaaccttcagcgtgtgatgctggccggtcgtgacgcggacactcctgccgcg
tacattgccgcagccaccactcctaagcagacggtcatcgtggggacactgggcacgctt
cacacgctgaccgccgctgtcgatcctgccactccagcgcttgtcatgatcggtgatgtg
gtaggagtgcgtgaacggattgcctggtttgagcgtgcaccattagctgggcggcgactg
ctgtgcgcccgcgcgcgacccggtcgctctgccattgcggctgaattgagggcgcttggg
gcagaggtgctggagataccggaggttgtggcggaaccgctttatggagaacccacgatg
gatgcggcccttgcgcgggtgcatgagtttcacgggatgatatttgggtgtgccgctggt
gtcgatgccgtgataccccgtattcccgtgttcactgtgccagtgatcgcagttggtgtg
gaggcggcacaggcgctatccaggcacgggatcgaaccggtcgcccgcgttcgaggcgcc
tgtgaggaagccctgcgcgaacatgcgcggctgctcaaggaccaggggttcctcctcgtg
acatcggaggcggggcgtccgaatttacgagccgaactcgccaggattggtgccacgatc
gaggccttggcggcctaccgctacagtcaccggatgccgctgatgccattgcctccgatc
gacctcgtggtgctgcccagctcttcggcggctcgtgctgtcttgtcaggcgacgttggt
caggcgatacgaacggtgcccatgattgccatcgggccacggaccgaggctgaggcgcgc
cattatggtgcgcaacaggtggtgcaggccgagcacgacacgtccgccgcgttggttgct
ctggccgtctcgctggtgggggctgtatga
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