Nitrospira defluvii: NIDE2193
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Entry
NIDE2193 CDS
T01281
Symbol
serS
Name
(GenBank) Seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
nde
Nitrospira defluvii
Pathway
nde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NIDE2193 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nde01007
]
NIDE2193 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nde03016
]
NIDE2193 (serS)
Enzymes [BR:
nde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
NIDE2193 (serS)
Amino acid related enzymes [BR:
nde01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
NIDE2193 (serS)
Transfer RNA biogenesis [BR:
nde03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NIDE2193 (serS)
Prokaryotic type
NIDE2193 (serS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
CBK41909
UniProt:
D8PFA0
LinkDB
All DBs
Position
complement(2134145..2135431)
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AA seq
428 aa
AA seq
DB search
MYDLRVLRDNLDQLRDQLGARGKDVAWADLRTLTEDRRTRTIRVEELRHQLKKGSDDVAR
LKREKQPADEAMAAMKALGETIKIHEEQLRVVEEQLAHIALRIPNLPHTSVPDGRDEADN
IEVRRWGTPPQLSAPAQSHWDLGEALGILDFDRAVRMAKARFAVLTGSGARLERALINYM
LDMHTTRHGYREVLPPLLVNRTAMTGTGQLPKFEDDLFQLRDEELFLIPTAEVPVTNLHR
EEIMAEESLPIRYTAYTPCFRREAGSYGKDTRGLIRLHQFNKVELVAFARPEQSYDELER
LTSHAEAILQGLGLHYRVITLCKGDMGFSAAKTYDIEVWLPSQQTFREISSCSNFEAFQA
RRANIRCRAKAGKKDNKPEFVHTLNGSGLAVGRTLVAILENYQQPDGTVTVPTALQPYMG
GMRTIERS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccttcgtgtattgcgtgacaacctggaccagctccgtgaccaattgggggca
cgcgggaaggatgtcgcgtgggcagatctgagaacactcacggaagatcgtcgaacccgc
accatacgggtcgaagaactacggcaccagctgaaaaagggatcggacgacgtcgcccgg
ctgaagcgagagaagcagccggccgatgaggccatggcggcgatgaaggccttgggagag
acgatcaaaatccatgaggaacagcttcgtgtcgtggaagaacagttggcccatatcgcg
ctgcgcattccgaacctcccacacacctctgtcccggacggccgggatgaggctgacaat
attgaagtgcgccgatggggaacaccgccgcagctctcggctccggcccaatcccactgg
gatcttggcgaagcgctcggcattctggatttcgatcgcgcggtgcgcatggccaaagcc
cgctttgccgtactgaccggatcgggagcccgactcgagcgggcgctcatcaattacatg
ctggatatgcataccacccggcacggctaccgggaagtgctgccgccgctgctggtcaat
cgcacggccatgaccgggaccgggcaattacccaagttcgaggacgatctgtttcaactg
cgagatgaagaactcttcctgattccgaccgcggaggtgccggtcaccaatctgcaccgg
gaagagatcatggccgaggaatcgttaccgatccggtataccgcctataccccttgcttt
cgacgagaagcggggtcctacgggaaggacacgcgcggcctcattcggctccatcaattc
aacaaggtcgaactcgtcgcgttcgcaagaccggaacaatcctatgatgagctggagaga
ttaacctcgcacgccgaggccattttgcaggggttgggactgcactatcgagtgatcacc
ctgtgcaaaggggatatggggttttctgcagcgaagacctacgacattgaggtatggttg
ccgtcgcagcagacgtttcgcgaaatttcctcctgcagcaatttcgaagcgttccaagcg
cggcgggcaaacattcgctgccgggccaaggccgggaagaaagacaacaagcctgaattc
gttcataccctgaacggatccggcttagcggtgggaagaacccttgtcgccattcttgaa
aattatcagcaaccggatggtacggtgaccgtcccgacagctcttcaaccctatatgggt
ggaatgcggactatcgaacgatcttag
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