Nitrospira defluvii: NIDE2554
Help
Entry
NIDE2554 CDS
T01281
Symbol
kdsB
Name
(GenBank) 3-deoxy-D-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
nde
Nitrospira defluvii
Pathway
nde00541
Biosynthesis of various nucleotide sugars
nde01100
Metabolic pathways
nde01250
Biosynthesis of nucleotide sugars
Module
nde_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NIDE2554 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nde01005
]
NIDE2554 (kdsB)
Enzymes [BR:
nde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
NIDE2554 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
nde01005
]
Lipid A
NIDE2554 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
Acetyltransf_8
Motif
Other DBs
NCBI-ProteinID:
CBK42263
UniProt:
D8PG76
LinkDB
All DBs
Position
2497873..2498664
Genome browser
AA seq
263 aa
AA seq
DB search
MPWDNIDVKRSVTVVIPARYGSSRFPGKPLVELLGKPMIQHVYEQAQACRAVDDVLVATD
DERIKTAVQRFGGQVVMTTEPYRTGTDRVAAVAESRTGDCFVDLQGDEILLHPDLITDLV
EPFLDSDATMGTLKRQIDSDQDLHNPGVVKVTTDREGYALYFSRAPIPLVRDDPKRAAVP
GLHFIHLGLYIYTRDTLQRLTALPTGTLEEAEKLEQLRALENGMRIRVWETIHGSLRIDS
PEDVPGALKHLHSRATGLGITHS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgccctgggacaacattgacgtgaaacgttcggtgacggtggtgattccagcccggtac
ggctcttcacgattcccgggcaaaccgctggttgagttgctgggcaaaccgatgatccaa
catgtctatgaacaggcacaggcttgtcgcgcggtcgatgacgtgctggtcgccacggat
gacgagcgcatcaaaacggcggttcagcgcttcggcggccaggtcgtgatgacgacggag
ccctatcgcaccggcaccgaccgcgtcgccgccgtcgccgagagccgcaccggcgactgc
ttcgtcgacctgcagggcgacgagatcctgctccatcccgatctcatcaccgacctggtc
gagccgtttctggacagcgatgccacgatgggcaccttgaaacgacagatcgattccgat
caagatctccacaacccgggtgtggtcaaggtgaccaccgaccgcgagggctacgcattg
tatttttcccgcgcgccgattccgttggtgcgggacgatccgaagcgggctgcggtgccg
ggactgcatttcattcacctgggcttgtacatctatacccgggacacattgcaacgcctg
actgccttgccgacagggacgttggaagaggccgaaaaactcgaacaactgcgcgccttg
gaaaacggtatgcgcatccgtgtgtgggaaaccatccacggctccttgcgcatcgatagc
cccgaggacgtgcccggcgcactgaaacaccttcacagccgtgcaaccggactcggcatc
actcactcatga
DBGET
integrated database retrieval system
