Nitrospira defluvii: NIDE2572
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Entry
NIDE2572 CDS
T01281
Name
(GenBank) putative dsRNA-binding protein, predicted ribosome maturation factor
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nde03009
]
NIDE2572
03016 Transfer RNA biogenesis [BR:
nde03016
]
NIDE2572
Enzymes [BR:
nde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
NIDE2572
Ribosome biogenesis [BR:
nde03009
]
Prokaryotic type
Other maturation factors
NIDE2572
Transfer RNA biogenesis [BR:
nde03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NIDE2572
Prokaryotic type
NIDE2572
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
CBK42280
UniProt:
D8PG93
LinkDB
All DBs
Position
complement(2513079..2513726)
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AA seq
215 aa
AA seq
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MALVLPFTDTTCDLVLSDVRQVLDAHGVVALPTETYYGLAVRPTDTAALQHLMELKGRPA
DKPILVLIGSPDQLPQLVRSIPPAAALLMELFWPGPLTIVFPAAPDLPALLTAGTGTIGV
RLSPLLQLQHLLQRTGPLTGTSANRSSEPSLDTAAAVQGALGAGVDLILDGGPTPGGLPS
TMVDARDRPHLLRAGALPTDLIRAALARQGYELSS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggctctggtccttccctttaccgacaccacctgcgatctcgttctgtcagatgtccga
caggtgttggatgcgcatggcgtcgtcgcgctgcccaccgaaacgtactacggtttggcg
gtccgcccgacggataccgcagcgctgcagcatctgatggaattaaagggtcggcctgcc
gataagccgatcctggtgctcatcggaagcccggaccaattgcctcagctggtgcgctcc
attcctcccgccgccgcccttctcatggaactgttctggcccggacctttgaccatcgtg
tttcctgcggcgcctgacttgccggcgttgttgaccgcggggaccggaacgatcggggtg
cgactgtctcccttgcttcagcttcagcatttgttgcagcgcacaggcccactgaccggg
accagtgccaatcgctcttcagaaccgtcgctcgacaccgccgcggccgtgcagggcgcg
ttgggggcaggggtggatctcatcttggatggagggcccacgccgggcggtctcccttct
accatggtagatgcacgtgaccgcccccatctgcttcgagccggggccctccccacggac
ctgattcgcgcggcgctggcgcggcagggatacgaactttcatcatga
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