Nitrospira defluvii: NIDE2643
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Entry
NIDE2643 CDS
T01281
Name
(GenBank) putative Permease, YjgP/YjgQ family
KO
K11720
lipopolysaccharide export system permease protein
Organism
nde
Nitrospira defluvii
Pathway
nde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIDE2643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE2643
Transporters [BR:
nde02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
NIDE2643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
EMC4
Motif
Other DBs
NCBI-ProteinID:
CBK42349
UniProt:
D8PGG2
LinkDB
All DBs
Position
2582948..2584039
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AA seq
363 aa
AA seq
DB search
MNILFRYMLREYVKIFGMCFAGLMTIYLVIDFFEKVRRFLRYDAHALDVLAYFVLKMPAI
SYQIAPLAVLMATLLTIGLLSRSHEITAMRSCGISLYWITSPFLFLGTVLALVLFAFSST
VIPLALAKAEQIKTTRIEKRAVPVSVKAAQPWVSLGGQTLMNIDTIDPGGAVLRKIRLYR
LSPTFELEQIAEAQRAVYSPQGWVLEDGIRRSFRQDGTVSVNSFQTEPLPLAQIPDDFTT
WLELDSETMTLPEIRAYVDRLHLGGTILPRLLTDYYGRIAFPCVTFIMVVVGIALSLRRT
GVRGSGMAMGIGQAMAVGFFYWSTHSVAIALGRGGALAPMLAGWMANLVFLTFGFYLLLK
VRY
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaacattctgtttcgctatatgctgcgcgagtacgtgaagatcttcggcatgtgcttc
gccgggctcatgacgatctacctcgtcatcgacttcttcgagaaggtgcgccgctttctg
cggtacgacgcccatgccctcgatgtgctggcctacttcgtcctcaagatgcccgcgatt
tcctaccagatcgcaccgctggctgtcctgatggcgaccctgctcacgatcggcctgttg
tcgcgcagccatgaaatcaccgcgatgcgcagctgcggtatcagcctctattggattacc
tccccgttcctgtttctcggcaccgtcttggccctggtcctgtttgccttcagttcgacc
gtcattcccctcgccctcgccaaggccgagcagatcaaaacgacccggatcgaaaaacga
gcggtgccggtctcggtgaaagcggcacagccatgggtcagcctgggcggccagaccttg
atgaacatcgacaccatcgacccgggcggcgcggtgttacgaaagatccgcctctatcgc
ctgagcccgacgttcgaactggagcaaattgcggaggcacagcgcgcggtgtattcgccg
cagggctgggtcctggaagacggcatccggcgctcgttccggcaggatgggacggtctcg
gtgaacagttttcagaccgaacccttgccgctcgcgcaaattcccgacgacttcacgacc
tggctggagttggattcggaaacgatgacactgccggagattcgcgcctatgtcgatcgg
ctgcatctgggcggcacgatccttccgcgcctgctgacggattattatggccggatcgcc
ttcccctgcgtgacctttattatggtggtcgtcggtattgccttgagcctccggcgcacc
ggcgtgcgcggcagcgggatggccatgggcatcggacaggccatggcagtgggatttttt
tactggtccacgcattccgtggcgattgcgctgggacgcggcggggcgctcgcgccgatg
ctggcaggctggatggccaatctggtatttctgacgtttggcttttatctgctgttgaag
gtccgttactga
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