Nitrospira defluvii: NIDE3012
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Entry
NIDE3012 CDS
T01281
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
nde
Nitrospira defluvii
Pathway
nde00051
Fructose and mannose metabolism
nde00541
Biosynthesis of various nucleotide sugars
nde01100
Metabolic pathways
nde01250
Biosynthesis of nucleotide sugars
Module
nde_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
NIDE3012 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NIDE3012 (gmd)
Enzymes [BR:
nde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
NIDE3012 (gmd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
Polysacc_synt_2
NAD_binding_10
NAD_binding_4
DUF6715
Motif
Other DBs
NCBI-ProteinID:
CBK42708
UniProt:
D8PHH1
LinkDB
All DBs
Position
complement(2962887..2963894)
Genome browser
AA seq
335 aa
AA seq
DB search
MNALITGITGQDGSYLAEFLLAKGYDVYGIIRRSSSFNTARIDGIYQDPHTSGAKLHLVY
GDLNDASSLNKIIRTVQPDEIYNLGAQSHVRVSFDIPEYTAEITGLGTVRLLEAIRESGL
RPKFYQASSSEMYGKVQEVPQRETTHFYPRSPYGAAKVYAHWITVNYREAYGLFACNGIL
FNHESPRRGETFVTRKITKAAARIKLGLQQDLFLGNLDAKRDWGYAGDYVGAMWLMLQQD
EPDDYVVATGETHTVREFLDVAFGHLGLDWQRYVKIDPRYYRPTEVDLLVGDPAKAQRKL
GWKPTVDFHRLAIMMVEADMEAEQLKLQGTASKGA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcattgatcaccggtatcacgggccaggatggttcgtatttggccgaatttctt
ctggccaagggatacgatgtgtatgggatcattcgccgttcgagttccttcaacacggcg
cggatcgacggtatttatcaggatccgcatacctcgggagccaagctgcatctggtctat
ggagatctcaacgatgcgagctcactgaataaaatcatccgtaccgtgcagcccgatgaa
atctacaatctcggggcgcagagtcatgtcagggtgagtttcgatattcctgaatacact
gcggaaatcacgggcctgggaacggttcggctgttggaagcgattcgtgagtcggggctg
cgtcccaagttttatcaggcgtcatcgagtgaaatgtacggcaaggtgcaggaagtgccg
cagcgggaaaccacgcacttttatccccgtagtccctacggcgcggcgaaggtctatgcc
cactggatcacggtcaattatcgtgaggcctatggcttgttcgcctgcaacggcatcctc
ttcaatcatgaatcgccgcgccgcggcgaaacattcgtgacgcggaagatcaccaaggcg
gcagcgcggatcaaactgggactgcagcaggacttgtttctcggcaacttggacgccaaa
cgggattggggatatgccggagattatgtcggggcgatgtggctgatgctgcagcaggat
gagccggacgactatgtcgtggcgaccggtgaaacccacacggtccgcgagtttctcgat
gtggcgttcggccatctggggttggactggcagcggtatgtgaagatcgatccgcggtat
taccgccccaccgaagtcgatctgctcgtcggcgatccggcgaaagcgcagcggaagctc
gggtggaaaccgacggttgattttcaccgactggcgatcatgatggtggaggcggatatg
gaagctgagcagctgaagttgcagggcaccgcatcgaagggggcctag
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