Nitrospira defluvii: NIDE3033
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Entry
NIDE3033 CDS
T01281
Symbol
waaA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
nde
Nitrospira defluvii
Pathway
nde00540
Lipopolysaccharide biosynthesis
nde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NIDE3033 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nde01005
]
NIDE3033 (waaA)
Enzymes [BR:
nde01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
NIDE3033 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
NIDE3033 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
NIDE3033 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
NIDE3033 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
nde01005
]
Lipid A
NIDE3033 (waaA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_4_4
Epimerase_2
Glycos_transf_1
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
CBK42729
UniProt:
D8PHJ2
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All DBs
Position
complement(2985382..2986740)
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AA seq
452 aa
AA seq
DB search
MMWYLLYNSLLLLVSPIILFVLLAKQRCRRGLPQRLGLRAEPPASEPGGRAGCIWIHAVS
LGEVVAVAPLVRELRRRYPETRLVVSTVTETGREAVEQRLEGVAEHRYAPLDFPWVVNQA
IDRLKPSLYIFVETELWPNILRSLQRRNVPSILVNGRLSTRSFERQRVPVIRDFYRTMLN
MISCCLMQSERDAQRMIELGAEPSRVRCTGNIKFDQPIPKAGAGGTAVSKAALGLTDREL
LLVAGSTHPGEEEAIVNAYRILSPEYPELRLVLAPRHIERAAQVEQMILLKGLTVSRRST
GGQAPMAGEGARVLVLDTRGELALLYRDAVVAFVGGTLAPVGGHNLLEPAVWGKPVLFGP
HTDHCAEVAALLVKAQGGSVVRDEQALAQDLRALLRDPAALQRMGQAAQRVVTDNQGALQ
RSAEVIATFLPAREASKNARVEQGRELSSRQS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgatgtggtatctgctctacaatagtcttctgctcctggtttccccgattatcctgttc
gtcttgttggccaagcagcgttgccgtcgcgggttgccgcagcgactgggactgcgcgcg
gagccgcccgcttccgagccaggcggcagggctggttgcatctggattcatgccgtgtcg
ttaggcgaggtggtcgcggtggcgccgcttgtgcgggagttgcgtcggcggtaccccgag
acgaggttggtcgtttcgaccgtgaccgaaaccgggcgcgaggcagtggagcagcggttg
gagggcgtggccgagcaccggtacgcgccgctcgattttccatgggtcgtcaatcaggcg
atcgaccgtctcaagccgagtctgtatatttttgtcgagacggaactctggccgaatatc
ctgcggagtttgcagcggcggaatgtgccgtcgattctcgtgaacggacgattgtccacc
cgttcgtttgagcggcaacgtgtgccggttatccgggatttctaccggaccatgctgaac
atgatcagctgttgcctcatgcaatcggagcgggatgcgcagcgtatgatcgagttaggc
gccgagccgtcacgggttcggtgcaccggcaacatcaagttcgatcaaccgattcccaag
gcgggggccggcggcacggccgtgtcgaaagcggcgctcgggctgaccgaccgggaactg
ttgctggtggccgggagcacccatcccggcgaggaagaagcgatcgtcaatgcctatcgg
atcctgagtcctgagtaccccgagctccgcttggtcctggctccccgccatattgaacgg
gcggcgcaggtggaacagatgatcctgctgaaaggcctcacggtgagccggcgtagcaca
ggcgggcaagcgcccatggcgggcgagggcgcgcgggtattggtcctggatacgcgcggg
gagttggccctgttgtatcgggacgcggtggtggcctttgtcgggggcactctcgcgccg
gtgggcgggcataatctcttggagccggcagtctgggggaaaccggtgctgttcggtccg
cacaccgaccattgtgccgaagtggcggcgctcctggtgaaggcgcagggaggatcggtg
gtacgggacgaacaggctcttgcgcaggatttgcgagcgctccttcgcgatcccgccgcg
ttgcagcggatggggcaggcggcgcagcgggtcgtgacagacaaccagggcgcgctccag
cgcagcgcggaggtcatcgcgacgtttctgccggcacgggaggcctcgaaaaacgcgcgg
gttgaacaggggcgtgagttgtcgagtcggcaatcgtaa
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