Nitrospira defluvii: NIDE3039
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Entry
NIDE3039 CDS
T01281
Name
(GenBank) conserved protein of unknown function, DUF1009
KO
K09949
UDP-2,3-diacylglucosamine hydrolase [EC:
3.6.1.54
]
Organism
nde
Nitrospira defluvii
Pathway
nde00540
Lipopolysaccharide biosynthesis
nde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NIDE3039
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nde01005
]
NIDE3039
Enzymes [BR:
nde01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.54 UDP-2,3-diacylglucosamine diphosphatase
NIDE3039
Lipopolysaccharide biosynthesis proteins [BR:
nde01005
]
Lipid A
NIDE3039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxI_C
LpxI_N
AHD
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
CBK42735
UniProt:
D8PHJ8
LinkDB
All DBs
Position
complement(2991499..2992341)
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AA seq
280 aa
AA seq
DB search
MAKQVAEHRHASDGQRIGLIAGNGRFPIIFADNAKRLGYSVSAVAHEGETDPELARHVDH
IHWIKIGQFGKLIEALKGDGVQRAVMLGGIKKTHIFSTVRPDFRALALAAKLIHLKDDDI
LRRVAEEIEQEGIQICESTFGLEGILVEEGTLTRREPSKKEWEDIRYGWDVGKQIGALDI
GQCVVVKDRVIVAVEAVEGTDGAIRRGGELAHGGAVVVKRCKPQQDLRFDLPAVGPRTIE
VMESVKASVLALEAGRGILLDRDDTIAKANRAGIAIIGMT
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagcaagtggccgagcataggcacgcatccgatgggcagcggatcgggctgatt
gcgggcaacggccggtttccgatcatttttgccgacaatgcgaagcgactcggatattcc
gtgtccgcggtggcgcatgagggcgaaaccgacccggaactcgcgcggcatgtcgatcac
atccactggatcaagatcggccagttcggcaagttgatcgaggcgctcaagggcgacggc
gtgcagcgtgcagtcatgctgggcggtatcaagaagacgcacatattttccacggtccgg
cctgactttcgcgccttggctctggccgcgaaactgattcatctcaaggacgacgacatc
ctccgccgggtggccgaagagatcgaacaggaaggcattcagatctgcgagtctacattc
ggcctggaagggatcctggtcgaggaaggcacgttgacgaggcgcgagccgagcaagaaa
gaatgggaagacatccggtacggctgggatgtcggaaaacagatcggagcgctggatatc
ggccagtgcgtcgtggtgaaggatcgggtgattgtggctgtcgaagccgtggaaggaacc
gatggcgcgatccgccggggcggtgaactggcgcatggcggcgccgtggtggtgaaacgg
tgcaaaccccagcaggatctccggttcgatcttcctgccgtcggtccgcgcaccatcgag
gtgatggagtctgtgaaggcgtcggtcctggcgttggaagcgggacgcgggattcttctg
gatcgtgacgacacgattgcgaaggcgaaccgggccggcatcgcaatcatcggaatgaca
taa
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integrated database retrieval system
