Nitrospira defluvii: NIDE3103
Help
Entry
NIDE3103 CDS
T01281
Name
(GenBank) putative 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
nde
Nitrospira defluvii
Pathway
nde00071
Fatty acid degradation
nde00280
Valine, leucine and isoleucine degradation
nde00310
Lysine degradation
nde00362
Benzoate degradation
nde00380
Tryptophan metabolism
nde00410
beta-Alanine metabolism
nde00640
Propanoate metabolism
nde00650
Butanoate metabolism
nde00907
Pinene, camphor and geraniol degradation
nde00930
Caprolactam degradation
nde01100
Metabolic pathways
nde01110
Biosynthesis of secondary metabolites
nde01120
Microbial metabolism in diverse environments
nde01200
Carbon metabolism
nde01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NIDE3103
00650 Butanoate metabolism
NIDE3103
09103 Lipid metabolism
00071 Fatty acid degradation
NIDE3103
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NIDE3103
00310 Lysine degradation
NIDE3103
00380 Tryptophan metabolism
NIDE3103
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NIDE3103
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NIDE3103
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NIDE3103
00930 Caprolactam degradation
NIDE3103
Enzymes [BR:
nde01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NIDE3103
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NIDE3103
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NIDE3103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
NAD_Gly3P_dh_N
NAD_binding_2
F420_oxidored
2-Hacid_dh_C
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
CBK42799
UniProt:
D8PHR2
LinkDB
All DBs
Position
complement(3059468..3060691)
Genome browser
AA seq
407 aa
AA seq
DB search
MYIYKVGVVGAGTMGAQIAEVVSFAGVPVLLADIQESLARRGVESVRAIYQARVDKSKMT
PEQLEEKMLLVTASPNLEALNDVDLVIEAVSEEVTLKQRLFRELDRVCARSAILASNTSA
LSISAIGASTTRPGKVLGLHFFNPAYAMPLVEVIPGLATDPQTVDDVVGFAESLRKTPVI
VKECAGFLVNRLLSPYLNEAVWCFQDGDVSIKEIDQDMVAFGMPVGPFTLLDTVGLDIAL
EVARILHRSYGPRMAPAPLLEALVKAGRWGIKSGRGFYEYSGGEERSGDQALDSLLQQVR
QSGGQTGMEWTRLRPLLAMVNEAVIAYQEGVASARDIDLAMVAGTGFPNEKGGPLHVADQ
LGIDHVLHELEALRDTLGLRFWPAPMLRRMVDAGFTGQLAGRGFFAY
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtacatctataaagtcggtgtggtgggtgccgggaccatgggcgcgcagattgctgaa
gtggtgagttttgccggcgtgccggtgctgctggcagatatccaggaatcactggccagg
cgaggcgtcgaatccgtgcgggcgatctatcaagcccgcgtggacaaaagcaagatgacg
cctgagcagctggaagagaaaatgttgctggtgacggcctcgcccaacctcgaggcgctt
aatgatgtcgatctggtcatcgaggcggtctcagaagaggtcacgctgaaacagcgcctg
ttccgcgaactggaccgggtctgtgcgcgaagcgccatcctggccagcaacacctccgcg
ctgtccatctcagccatcggggcttcaaccacgaggcccgggaaggtgctcggacttcat
tttttcaatcctgcctatgcgatgccgctggtggaggtcatccccggcctggccacggat
ccccagactgtcgatgatgtcgtcggttttgccgaaagccttcgcaagacgccggtgatc
gtgaaggaatgcgcaggtttcctcgtcaatcgtctgctctctccctatctgaatgaagcc
gtgtggtgcttccaagacggcgatgtgtccatcaaggagatcgatcaggacatggtggca
ttcggcatgccggtcggcccattcacgctgctggataccgtcgggctggatattgcgctc
gaagtcgcgcgcattctccaccgatcctacggaccacggatggcgccggcgccgcttctc
gaagccttggtcaaggcggggcgatggggaatcaaatcggggcggggcttctacgagtat
tcgggaggcgaggaacggagcggcgatcaggccctcgattctctgctgcagcaagtgcgg
cagagtggcgggcagaccgggatggaatggaccagattacgccctctccttgccatggtg
aatgaggcggtgattgcgtaccaggagggcgtcgcgtcggcgcgagatatcgatctggcg
atggtggcgggaaccggatttcccaacgagaagggaggaccgctgcatgttgccgaccag
ctcgggatcgaccatgtgttgcatgaattggaagcgttgcgagatacgctgggcctacgc
ttctggccggcgccgatgttgcgccgaatggtcgacgccggcttcaccggacagctcgcg
ggacgagggttctttgcctattaa
DBGET
integrated database retrieval system
