Nitrospira defluvii: NIDE3105
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Entry
NIDE3105 CDS
T01281
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nde
Nitrospira defluvii
Pathway
nde00061
Fatty acid biosynthesis
nde00071
Fatty acid degradation
nde01100
Metabolic pathways
nde01212
Fatty acid metabolism
nde02024
Quorum sensing
nde04146
Peroxisome
Module
nde_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NIDE3105 (fadD)
00071 Fatty acid degradation
NIDE3105 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NIDE3105 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIDE3105 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nde01004
]
NIDE3105 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nde04147
]
NIDE3105 (fadD)
Enzymes [BR:
nde01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NIDE3105 (fadD)
Lipid biosynthesis proteins [BR:
nde01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NIDE3105 (fadD)
Exosome [BR:
nde04147
]
Exosomal proteins
Exosomal proteins of breast milk
NIDE3105 (fadD)
Exosomal proteins of breast cancer cells
NIDE3105 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CBK42801
UniProt:
D8PHR4
LinkDB
All DBs
Position
complement(3061932..3063647)
Genome browser
AA seq
571 aa
AA seq
DB search
MERVWISRYDAGVPLSSAYPEWTVPDLLRRSASCFPESTALFFYGARLSFRELNDLTTRF
ARGLLRLGVKRGDRVALMLPNIPQAVIAYYGVLKAGAIVAPMNPLYVEREIHSQLADAGS
EIIVALDLFYPRVHAVREQTGLPERIIITSLGDFLPPVKRLLYPLKARLAKRWVAVEKTP
PVYDFLALLDAASPHTEDDSPLLPSMEPDALAQIQYTGGTTGTPKGVMLSHRNVVVNAMQ
GRLWCSDFQEGKEVFLGAVPFFHCYGLSTCQNLAVATGSQIVLLPRFHAEEAVKLIHQHR
VTIVSGVPVMFAMITDCPKVGQYDLHSIRVCLCGASPLLSEVQERFERLSGVRISEGYGL
TEAGPTTHCNPIHGVHPQGSMGLPFPDTDARIVDEETGLRDIPTGEAGELIVRGPQVMQG
YWRKTEDTQAVLRDGWLYTGDIVRRDECGFFFFLDRKKDVIKPWGETVYPREVEEILYQH
PAVREAVVVGAPDHHYGEAVKAFVVQKEGCAVTERELIEHCRRSLARFKVPVAIEFRTEL
PRTIIGKVLRRALRDEADTVPAGMQASRKAM
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgtgtggatcagccgctacgatgcgggtgttcctctctcctccgcctatccg
gaatggaccgtcccggacctgcttcgtcgctccgcctcatgtttccccgaatcgaccgca
ctcttcttttatggcgcgcgtctttccttccgtgaactgaacgatctgaccacgcgtttt
gcacgtgggttgctgcggctcggcgtgaagaggggcgatcgggtcgctctcatgctgccg
aatattccacaggcggtcatcgcctattacggcgtattgaaggccggagcgattgtcgcg
cccatgaatcctctttacgtcgaacgtgaaattcacagtcagttggccgacgccggcagc
gagattatcgttgcgctggatctgttttatccccgcgttcatgccgtccgcgagcagacg
ggcctgcctgaacggatcatcatcaccagcctcggagattttcttccgcccgtgaagcga
ctgctctatccgcttaaggcccggctggcaaagcgctgggtggcggtcgaaaaaactccc
ccggtctatgactttcttgcattgctcgacgcggcatccccccacaccgaagatgattcc
ccgcttctaccatcgatggagccggacgcgctggcccagattcaatataccggcggcacg
accggcacccccaagggtgtcatgctctcgcatcgtaacgtggtggtcaatgcgatgcag
gggcgcctctggtgttcggattttcaggaggggaaggaagtcttcctgggcgcggtgccg
tttttccattgttatgggctgagtacctgccagaatctcgccgtcgcgaccggttctcag
atcgtcttgctcccgagattccatgcggaggaggcggtgaagctgattcatcagcaccgg
gtcaccattgtgtcgggcgtgccggtcatgtttgccatgatcacagattgtccgaaagtc
ggacagtacgacttacattcgatacgggtgtgcctttgcggagccagcccgttgctgagc
gaggtgcaggaacgattcgagcggctgagcggggtcaggatttcagaaggatacgggttg
accgaggcgggtcccaccacccattgcaacccgattcacggggttcatccgcaaggctcg
atggggttgccgtttcccgatacggacgcgcggattgtggatgaagaaacgggcctccgg
gacatccctacgggagaagcgggggaactgatcgtccgcgggccgcaggtgatgcagggc
tattggaggaaaaccgaggacacgcaagcggtgttgcgcgacggctggctctacaccgga
gatattgtgaggcgggatgaatgtggctttttcttttttctggatcgcaagaaagatgtc
atcaagccatggggggagaccgtctatccgcgggaggttgaagaaatcctgtatcagcat
cccgccgtgcgtgaggcggtggtggtgggggctcccgaccaccattatggagaagcggtc
aaggcgtttgtcgtgcagaaggagggatgtgctgtcaccgagagagagttgatcgagcac
tgccgccggtcgctggcacgattcaaggtcccggtggctatcgaatttcgcactgaattg
ccacgcaccattatcgggaaggtgttgcgacgcgccttgcgcgatgaggcggatacggtc
ccggccggtatgcaggcgtcgcgcaaggcgatgtga
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