Nitrospira defluvii: NIDE3118
Help
Entry
NIDE3118 CDS
T01281
Symbol
scpAa
Name
(GenBank) Methylmalonyl-CoA mutase (N-terminal fragment)
KO
K01848
methylmalonyl-CoA mutase, N-terminal domain [EC:
5.4.99.2
]
Organism
nde
Nitrospira defluvii
Pathway
nde00280
Valine, leucine and isoleucine degradation
nde00630
Glyoxylate and dicarboxylate metabolism
nde00640
Propanoate metabolism
nde01100
Metabolic pathways
nde01120
Microbial metabolism in diverse environments
nde01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NIDE3118 (scpAa)
00640 Propanoate metabolism
NIDE3118 (scpAa)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NIDE3118 (scpAa)
Enzymes [BR:
nde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.2 methylmalonyl-CoA mutase
NIDE3118 (scpAa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MM_CoA_mutase
Motif
Other DBs
NCBI-ProteinID:
CBK42812
UniProt:
D8PHS5
LinkDB
All DBs
Position
3073547..3075142
Genome browser
AA seq
531 aa
AA seq
DB search
MNERKSRFSSLSGLEIERVYGPEHLKGWTVEQDLGRPGSFPYTRGIYPDMYRSRLWTMRQ
FAGFGSADDTNRRFKYLLTQGQTGLSVAFDLPTLMGLDADDPMARGEVGHCGVAISSLAD
MERLFDGIPLDQVTTSMTINGPAAVLFAMYLAVADKRGIPFDRLGGTIQNDILKEYIAQK
EWLFPPEPHLAIIVDTIDYCTAHVPKWHPISISGYHIREAGSTAVQELAFTLYDGLTYVD
AAVKSGIDVDAFAPRLSFFFNVHNDFFEEIAKFRAARRLWAREMEHRYHPKNPRSLQLRC
HAQTAGCSLTAQQPMNNVVRTTLQALAAVLGGTQSLHTNSMDETLALPTEEAVTLALRTQ
QVIASESETVNCVDPLGGSYLVESLTNRLEEGARDYFRTLDRMGGMVTAIEQGFPQREIL
DASQRYQKEIEHQERPIVGVTDYVEQEARSIPTLKIGPEVEQEQVARLSDLRKSRDPFKM
AGSLEELQETAACHQKLMPALIEAVKAKATLGEICAALKEVYGTYREPVVL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcggaaatctcgattctcctccctctccggattggagatcgaacgggtctac
ggcccggagcatctgaagggttggaccgtcgagcaggatctcggccgaccgggctcattc
ccctacacccgcggcatatacccggacatgtatcgcagccgcctctggaccatgcggcaa
ttcgccggtttcggctccgcagacgatacgaatcgacgcttcaagtatctcctgacacag
ggccagacgggcctcagcgtcgccttcgacctgccgacgctcatgggccttgatgccgat
gatccgatggcacggggcgaagtgggccactgcggcgtggccatctcctcactcgccgac
atggaacggctgttcgacggcatcccgctcgaccaggtcaccacctcgatgacgattaac
ggaccggcggcggtgctctttgccatgtatctggccgtggcagacaaacgcggcatcccg
ttcgaccggctcggcggcacgattcaaaacgatattctgaaagaatatatcgcgcaaaag
gagtggctcttcccgcccgaaccgcacctcgcaatcatcgtcgatacgatcgactactgt
accgctcatgtgcccaagtggcatccgatcagcatcagcgggtaccacatccgggaggca
ggctcgacagccgttcaggaactcgcgtttacactctacgacggactcacctatgtggat
gcggccgtgaagtccggcatcgatgtggatgccttcgcgccgcgactctccttcttcttc
aacgtgcacaatgacttcttcgaagagattgccaaattccgagccgcccggcgcttgtgg
gcgcgtgaaatggagcatcgataccatccgaagaatccccgttcactccaactccgctgt
cacgcccagacggccggctgctccttgaccgcccaacagccgatgaacaacgtggtgcgc
accaccctccaagccctggctgcggtgctcggcgggacccaatcgctccacaccaactcg
atggatgaaaccctggcactccctacggaagaagcggtgacgctggccttgcggacacaa
caggtcatcgcctccgaaagcgaaaccgtcaactgcgtcgatccgttgggcggctcctac
ttggtcgaatcgctgacgaaccgattggaagaaggagcgcgggactatttccgaacactg
gatcggatgggtggaatggtgacggcgatcgaacagggatttccgcagcgggaaattctc
gatgcctcgcaacggtatcagaaagaaattgaacaccaggagcggcccatcgtcggcgtc
accgattatgtggaacaggaagcacgctccatccccactttgaagatcggaccggaagtg
gaacaggaacaggtcgcgcgcttgtccgacctcagaaaatcgcgtgatcccttcaagatg
gccggctcgttggaggaattacaggaaacggccgcctgccaccagaagctcatgccggcg
ctcatcgaggcggtgaaagcgaaggcgacgttgggagagatctgcgccgcgttgaaagaa
gtgtacggaacctatcgcgagccggtcgtgttatga
DBGET
integrated database retrieval system
