Nitrospira defluvii: NIDE3135
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Entry
NIDE3135 CDS
T01281
Name
(GenBank) conserved protein of unknown function, putative Adhesin
Organism
nde
Nitrospira defluvii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
DUF4347
Cadherin_3
Cadherin_4
Big_9
Ig_SibA
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-ProteinID:
CBK42829
UniProt:
D8PHU2
LinkDB
All DBs
Position
complement(3092391..3098549)
Genome browser
AA seq
2052 aa
AA seq
DB search
MPPRYIVCSLLQDDGLSTEKEAGNWVYLRLSGAGMFNLFKKLRRKPAEAPAASQSAAPST
IKQSLLTLEQRLMFDAAAAATAAEVHSEQVAQDQAEAAVSSEGTVESMTHEQQESQELLH
AMASYTPGESATEVVFVDPTVPDYESLLVGMGPNVEVVVLDASRDGVEQIAASLSGRSGI
DAIHLISHGDAGTLQLGTGTLNAESMSTRYADEFTTIQQTLSEQADILVYGCNFAEGDVG
QAAVARLAELTGADVAANSDRTGHIDLGGDWKFETQVGSIETDLAITDAAQMDWKGILTT
ETVGDQFSSSSYDNHDGTQKWASDWSETDAGGGGASGGDVHVASSQLRINAGSVGNQASR
QVDLSGTSGAILTFDYTNSLSGSDQIEIRVSADGTTYTTLTDGVFSPMSNAGSGTVKLDI
SGYASASTTIQFIVTGVGGGDPLYVDNVQVSYDTGAANSAPTISSNGGGTTASITVGENS
TVVTTVTATDVDAGHTLGYSIAGGADAARFTISNSTGQLSFVSVPSYEAPADSGGNNVYD
VTVQVSDGQGGTDTQAIAVTVANVNEAPTDLALSANTVAENAANGTVVGTVSGSDVDTGD
TKTYSLTDSAGGRFAINSSTGQLTVANASLLNYESATSHTVTARVTDSGGLTYDETFTIN
VTDVNEAAPRITSNGGGATALINIAENSTAVTRVTASDADTRQTLGYSIVGGADAAKFTI
NSSTGALSFVSAPNYEAPTDSGGNNIYDVTVQVSDGNGGVDSQAISVTVTAVNERPTDLS
LSANTIAEHAANGTVVGTVSGTDPDAGDTKSYSLTNTAGGRFAINRTTGALTVANSTLLN
YEAATSHAVTVRVTDRGGLTYDETFTINLTNVHEAPSGTNATVTINEDTSHILTAANFGF
SDVDAGDALSAVRIDTLPTAGTLTLSGVAVTAGQVITTADLAAGHLVFTPAANANGTGYA
RITFSVRDSTSLYDPTPNQLTVNVTAVNDRPVDLSLSANTIAEHAANGTVVGTVSGTDPD
AGDTKSYSLTNTAGGRFAINRTTGALTVANSTLLNYEAATSHAVTVRVTDRGGLTYDETF
TINLTNVHEAPSGTNATVTINEDTSHILTAANFGFSDVDAGDALSAVRIDTLPTAGTLTL
SGVAVTAGQVITTADLAAGHLVFTPAANANGTGYARITFSVRDSTSLYDPTPNQLTVNVT
AVNDRPVDLSLSANTIAEHAANGTVVGTVSGTDPDAGDTKSYSLTNTAGGRFAINRTTGA
LTVANSTLLNYEAATSHAVTVRVTDRGGLTYDETFTIHLTNVHEAPSGTNATVTINEDTS
HILTAANFGFSDVDAGDALSAVRIDTLPTAGTLTLSGVAVTAGQVITTADLAAGQLVFTP
AANASGTGYARVTFSVRDSTSLYDPTPNQLTVNVTAVNDRPTDLSLSANTIAEHAANGTV
VGTVSGTDPDAGDTKSYSLTNTAGGRFAINRTTGALTVANSTLLNYEAATSHAVTVRVTD
RGGLTYDETFTIHLTNVHEAPSGTNATVTINEDTSHILTAANFGFSDVDAGDALSAVRID
TLPTAGTLTLSGVAVTAGQVITTADLAAGHLVFTPAANANGTGYARITFSVRDSTSLYDP
TPNQLTVNVTAVNDRPVITANSGSSVAEGGLDTITSAELAVVDVDNSAAQLRFSVGTGPA
HGRLELTTRPGVALATFTQADLAANRLVYRHDGSETLSDRFTFAVSDGAGGSVGTTTMTL
TITPVNDAPTIVSDGGTAAASITVAEHVTGITVVTGADVDVPVQALTYSISGGADQAQFT
IDATTGALSFVAPPDFEAAADANGDNVYVVQVRVTDSQGGTAMQTIQVRVTDGAEAISPL
LPSSLIPMPSAQAGTSVQPHDEPLPFAVRQEPVNAVVSMNGTDLAGTMSRYTDSTPPRVA
PPSGDVRHGEGQPAASRSVQSDDSGSWNSSPVSPTDAIEAGRAGNSGPQPSATELVLNKL
DEVILSLREAVIVDREPQSLMAQVTALTGTTLSVGFVLWAVRKGRLLAGCCATIPTLSAE
EPGRRQRLRPRL
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccgttatatcgtctgctcccttcttcaggatgacggcctttctaccgaaaaa
gaagcgggaaactgggtgtacttgaggctgtcgggcgcaggtatgttcaatctattcaaa
aaactgagacgtaagccggcggaagccccagcggcgtcgcagtctgccgctccctccaca
atcaagcagtcgcttctaaccctcgagcaacggttgatgtttgacgcggcggccgcggcg
accgcggccgaggtgcactccgaacaggtggctcaagatcaggccgaggcggcggtctca
tcggaggggactgtcgagagtatgactcatgagcagcaggaatctcaggaactactccac
gcgatggcttcctacactcccggcgaatccgcgacagaagtggtcttcgtcgaccccacg
gttccggattacgaatctctgctcgtgggcatggggcccaatgtggaggtcgttgtgctg
gatgcctcccgagacggggtcgagcagatcgccgcgtcgttaagcgggcgatcgggcatc
gacgccattcatctgatttcgcacggcgatgctggaacattgcaattgggcaccggcacg
ttgaatgccgaatcgatgtcgactcgttacgcggacgagttcacaacgattcagcagacc
ctgtcggagcaggccgatattctcgtgtacggctgtaattttgccgagggggatgtcggc
caggcggctgtggcccggttggctgaactgaccggagctgacgtggcggcgaacagcgac
agaaccggccacatcgatttgggcggcgattggaaattcgaaacccaggttggatcgatc
gaaaccgatctcgcgatcaccgatgccgcgcagatggactggaaggggatcctgacgacc
gagactgtcggcgaccaattctcctcaagttcctacgacaatcacgatgggactcagaag
tgggcctcagattggtccgaaaccgatgccggcggcggtggggcaagtggcggggatgtg
catgtcgcttcatcacaactgaggatcaacgccggttccgtgggaaaccaagcgtcgcgg
caggttgatctgtcaggaacgagcggcgcaatcctcacattcgattacaccaactcgttg
tcgggttccgatcaaatcgagattcgcgtgtcggccgacggaacgacctataccacgctc
accgacggcgtcttctcccctatgtcgaatgccggaagcggcaccgttaagctcgacatt
tccggttatgcctccgcgagtacgacgatccaattcatcgtcaccggggtgggcgggggc
gatccgctgtatgtcgataacgtgcaggtcagctatgacaccggcgccgcgaacagtgcg
ccgacgatcagcagcaacggcggtggaacgacggcgtcgatcacggtcggggagaacagc
acggtcgtcacgaccgtcacggctactgacgttgatgcagggcacaccctaggctattca
atcgccggcggggcagacgcagctcgatttaccatcagcaacagcacgggtcagctgagt
tttgtctcggtacccagctatgaagccccggcagacagcggcgggaataacgtgtacgac
gtcacggtgcaggtgtctgacggccagggcggcacggacacccaagccatcgccgtgaca
gtggcaaacgtcaatgaggcaccgacagacctggccttgtcggcgaacacggtggcggag
aatgcggccaatggcaccgtcgtcggcaccgtgagcggcagcgatgtggatacgggcgat
accaagacgtattccctgaccgacagcgccggcggccggtttgcgatcaatagcagcacg
ggccagcttaccgtagccaacgcatcgctcctcaattacgagagcgcaacgagccacact
gtgaccgcacgggtgacggattccggcggactgacctacgacgagaccttcaccatcaac
gtgacggatgtgaatgaagcggctcccaggatcaccagcaatggcgggggggccacagcc
ctcatcaatattgcggagaattccacggcggtcaccagggtcactgcctccgacgccgat
accaggcaaaccttgggctactcgattgtcgggggggccgatgccgccaagtttacgatc
aacagtagcaccggtgccttgtcgtttgtctccgccccgaactacgaggcgccgaccgac
agcggcggtaacaacatctacgatgtgaccgtccaagtgtccgacggaaacggtggcgtg
gattctcaggccatcagcgtgaccgtcactgccgtcaatgagagaccgacggacctgagt
ctgtcagcgaacacgattgcggagcacgcggccaatgggaccgtggtgggcacggtgagc
gggaccgatcccgacgccggcgacacgaagagttacagtttgaccaatacggcggggggg
cggtttgcgatcaaccggacgaccggcgccctcacggtcgccaacagtaccttgctgaac
tacgaagcggcgacgagccatgccgtgaccgtccgggtgaccgatcggggcggcctgacc
tacgatgagacgttcacgatcaacctgaccaacgtgcacgaggcccccagcgggaccaat
gcgaccgtcacgatcaacgaagatacgtcgcacatcctgacggcggccaatttcgggttc
agcgatgtggatgccggcgacgcgctgagtgcggtgcggatcgacacgctgccgacggcc
gggaccctgacgctgtcgggcgtggcggtgacggcggggcaggtgatcacgacggcggac
ctcgcggcgggccacctggtgtttaccccggcggccaacgccaacgggaccggctacgcc
cgcattaccttctccgtgcgcgacagcaccagtctgtacgacccgacgcccaaccagctc
acggtcaatgtcactgcggtcaatgatcggccggtggacctgagtctgtcggcgaacacg
attgcggagcacgcggccaatgggaccgtggtgggcacggtaagcgggaccgatcccgac
gccggcgatacgaagagttacagtttgaccaatacggcgggggggcggtttgcgatcaac
cggacgaccggcgccctcacggtcgccaacagtaccttgctgaactacgaagcggcgacg
agccatgccgtgaccgtccgggtgaccgatcggggcggcctgacctacgatgagacgttc
acgatcaacctgaccaacgtgcacgaggcccccagcgggaccaatgcgaccgtcacgatc
aacgaagatacgtcgcacatcctcacggcggccaatttcgggttcagcgacgtggatgcc
ggcgacgcgctgagtgcggtgcggatcgacacgctgccgacggccgggaccctgacgctg
tcgggcgtggcggtgacggcggggcaggtgatcacgacggcggacctcgcggcgggccac
ctggtgtttaccccggcggccaacgccaacgggaccggctacgcccgcattaccttctcc
gtgcgcgacagcaccagtctgtacgacccgacgcccaaccagctcacggtcaatgtcact
gcggtcaatgatcggccggtggacctgagtctatcggcgaacacgattgcggagcacgcg
gccaatgggaccgtggtgggcacggtaagcgggaccgaccccgacgccggcgatacgaag
agttacagtttgaccaatacggcgggggggcggtttgcgatcaaccggacgaccggcgcc
ctcacggtcgccaacagtaccttgctgaactacgaagcggcgacgagccatgccgtgacc
gtccgggtgaccgatcggggcggcctgacctacgacgagacgttcacgatccacctgacc
aacgtgcacgaggcccccagcgggaccaatgcgaccgtcacgatcaacgaagatacgtcg
cacatcctcacggcggccaatttcgggttcagcgacgtggatgccggcgacgcgctgagt
gcggtgcggatcgacacgctgccgacggccgggaccctgacgctgtcgggcgtggcggtg
acggcggggcaggtgatcacgacggcggacctcgcggcgggccagctggtgtttaccccg
gcggccaacgccagcgggaccggctacgcccgcgttaccttctccgtgcgcgacagcacc
agtctgtacgacccgacgcccaaccagctcacggtcaatgtcactgcggtcaatgatcgg
ccgacggacctgagtctgtcggcgaacacgattgcggagcacgcggccaatgggaccgtg
gtgggcacggtaagcgggaccgaccccgacgccggcgatacgaagagctacagtttgacc
aatacggcgggggggcggtttgcgatcaaccggacgaccggcgccctcacggtcgccaac
agtaccttgctgaactacgaagcggcgacgagccatgccgtgaccgtccgggtgaccgat
cggggcggcctgacctacgatgagacgttcacgatccacctgaccaacgtgcacgaggcc
cccagcgggaccaatgcgaccgtcacgatcaacgaagatacgtcgcacatcctcacggcg
gccaatttcgggttcagcgatgtggatgccggcgacgcgctgagtgcggtgcggatcgac
acgctgccgacggccgggaccctgacgctgtcgggcgtggcggtgacggcggggcaggtg
atcacgacggcggacctcgcggcgggccacctggtgtttaccccggcggccaacgccaac
gggaccggctacgcccgcattaccttctccgtgcgcgacagcaccagtctgtacgacccg
acgcccaaccagctcacggtcaatgtcactgcggtcaatgatcggccggtgatcaccgcc
aacagcgggagcagcgtggccgaagggggactcgacacgattacgagcgcagagcttgcg
gtggtggacgtggacaattctgccgcccagctcagattctctgtcgggaccggtcctgcc
catggtcggctggagttgacgaccaggccgggcgtggcgctggcgacttttacccaggct
gatcttgcggccaaccgcctggtctatcgtcacgatggatcagaaacgctgagcgatcgc
tttacgtttgcggtgagcgacggggcgggaggttcggtgggcacgaccacgatgacgctg
acgatcacaccggtgaacgacgcgccgaccatcgtcagcgatggaggaacggcggccgct
tcgatcacggtcgccgaacatgtgaccggcattacggtcgtaaccggcgcagatgtggat
gtgcctgtgcaggccttgacctactcaatcagcggcggagcggatcaggcgcagtttacg
atcgacgctacgaccggtgcgctgagttttgtggcccctcctgatttcgaagcggccgct
gacgccaatggcgacaatgtgtatgttgtgcaggttcgtgtcaccgacagccaaggcggc
acggcgatgcaaaccattcaggttagggtcacggatggggcggaggcgatcagtccgttg
cttccttcctccctcattccgatgccctcggcacaggcgggcacatccgttcagcctcat
gacgaaccactgccgttcgcagtgcgacaggagccggtgaatgcggtggtgtctatgaat
gggacggatctcgccggtacgatgagccgctataccgacagcacgccgccgcgcgtagcg
cccccttcaggcgatgttcgtcatggggaagggcaacctgccgcgtcacgctctgtacag
tcggatgacagtgggtcctggaattcatccccggtctcgcctacggatgcgatcgaggcg
ggcagggctggtaattcggggccgcagccctcggcgactgaactggtcctgaataaattg
gatgaagtgatcctatccctgcgggaggcggtcattgtggaccgcgagcctcagtcgttg
atggctcaggtgactgcgttgacggggacgactctctctgtgggatttgtgctttgggcc
gttcgtaaaggaaggctcctggctggttgctgcgcgaccattcctacattgtcggcagag
gagccgggccggcgtcaacgcctgcgcccacggctatag
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