Nitrospira defluvii: NIDE3396
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Entry
NIDE3396 CDS
T01281
Name
(GenBank) putative PP-loop ATPase, YdaO type
KO
K21947
tRNA-5-methyluridine54 2-sulfurtransferase [EC:
2.8.1.15
]
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nde03016
]
NIDE3396
Enzymes [BR:
nde01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.15 tRNA-5-methyluridine54 2-sulfurtransferase
NIDE3396
Transfer RNA biogenesis [BR:
nde03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
NIDE3396
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
PAPS_reduct
TtuA_LIM_N
DZR
Diphthami_syn_2
Asn_synthase
Motif
Other DBs
NCBI-ProteinID:
CBK43082
UniProt:
D8PIJ5
LinkDB
All DBs
Position
3374031..3374948
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AA seq
305 aa
AA seq
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MRAVISLPRHNAAFCKGCFTTFVHEQVARAIKSFKMFTPEDRILVAVSGGKDSLALWHIL
LALGYRADALYVNLGIGGYSEESHRKVRHYADTVAAAHGAKLIVHVVEQEAGAGIRELAT
ILHRPTCSTCGTIKRYQFNRAAVEQDYDVMATGHNLDDEAARLLGNVLHWQDEYLDKQSP
TLPASVEGFAKKVKPLCRLSEREIAAYAVVNRIDYIVEECPMAKGSKMILYKEVLNRLET
ESPGTKQRFYWGFLEKQTKPEPATESMAEKDQRTLHPCQSCGQPTTADTCSYCKMMAKAK
TATPR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagagcggtcatcagcctaccccggcacaatgccgccttctgcaaaggctgctttacg
acctttgtgcacgagcaggtcgcacgcgcaatcaagtcgttcaagatgtttacgcccgag
gaccgcatccttgtggccgtctccggcggtaaagacagcctcgctctgtggcatatcctg
ctggccctcggctaccgcgccgacgcgctgtatgtgaatctcggcatcggcggctactcc
gaggagtcgcaccggaaggtgcgccactatgccgacaccgtggccgccgcccatggcgcc
aaactgatcgtgcatgtcgttgagcaggaagccggcgccggcattcgtgaattggccacc
attcttcatcgtcccacctgttcaacctgcgggaccatcaaacggtaccaattcaatcgc
gccgcggtagaacaggactacgacgtgatggccacaggccacaatctcgacgacgaagct
gcccgcctgttaggcaacgtgttgcactggcaggatgaatatctggacaagcaaagcccc
accttgccggcctccgtcgaaggattcgccaagaaggtgaaaccgctttgccgcctgtca
gaacgggaaatcgccgcctacgcggtcgtcaatcgcatcgactacatcgtcgaagaatgc
ccgatggctaagggatccaaaatgatcctctataaagaggtcctcaaccggctggaaacg
gaatcgcccggcacgaagcaacgtttttactgggggttcctagagaagcaaaccaagccg
gagcccgccacggaatccatggccgagaaggatcagcgaacgctccacccctgccaatcc
tgcggacaacccaccaccgccgacacctgctcctactgcaagatgatggcaaaggccaag
accgcgaccccgcgttag
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