Nitrospira defluvii: NIDE3454
Help
Entry
NIDE3454 CDS
T01281
Name
(GenBank) protein of unknown function, putative Hemolysin-type calcium-binding protein
Organism
nde
Nitrospira defluvii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
HCBP_related
RTX_C
Motif
Other DBs
NCBI-ProteinID:
CBK43140
UniProt:
D8PIQ3
LinkDB
All DBs
Position
complement(3441502..3448830)
Genome browser
AA seq
2442 aa
AA seq
DB search
MGTWLRFALQQIAAESYFDWIDLSNPQRVIGQLQLGNNNVTGDDPTAPVLPGKIRMTTLQ
AEQFVQRYQIVDHHANDATGFSATLLVDTETNSYTLSFRSSEYAADVNGGDRSRDILGAD
AEVKNSGFAFAQLVSMTRYFEGLQQGKRSDGTIDPSLAAFFGNSQNQLNVTGYSLGGHLA
TVFTELYADRVAQTYTFNGAGRGEFGSVQLNGEAQEAERIREMLANLDSRLRTTDPLGSL
FVSGATGDIYTDERYVVALDATQILYPTSGTQILPGLTGGITRTDGAFGKIQQIFGHADT
GQDVEVVANSGVHAKAIQVLIEGQPLVEDVNIQNPWESQYGNSHSIALIVDSLAIQELFQ
KADPQLQQAQIESILKASSGQVAIPYPEQGMPVPLAEGDTLEKALDALARVFHVDGVATP
FGRLPGDFGSLTYRQPFYERLEAVRTAIGHQVLSIVPLMGKSAEELQTLASLESSTSLAY
RFALRELTPFAVLGASASSTEALYASHNEAGELALVNPESGIGELSSQYLKDRAAFLIEK
INVNSSPIGLPSVTHFKDFQSSYEIGSATLPLPQVLFGDEVGETLDGSVFRGDHLYGGDG
NDHLFGYGGKDYLEGNRGNDILDGGSGADTILGGTGDDTYLVDDSGDIVREYANSGVDEV
RSSVTFTLDSQIEYLTLTGSNAIDGIGNELGNILIGNSAKNVLNGGDGQDHLVGNEGNDT
LIGGAGNSDLLEGGVGFDTYIYRSGDGVDRIEDSDVQGQIIFDDHLLQGGIRRAGDAANS
YTSLDGRTTYMMSGTDLIVNGVLIVNENFQSGQMGIQLRDVSPIPTDTGLPAGPFGHVLE
GGSGDETLIATNPYSYAMYGNEGDDVLTSQVPSIHDSFSDLRDGGAGDDILVGAGGNDYL
VGGSGDDYADVSDGDIFFGGDGNDIAVTDTEIANYAWTHIGSGTHYIDGGAGNDVLLGAL
GVDVLLGGEGEDVLRGENRPAGWIAKVYDVDLIPQSFPMPAFSSALGADDYLDGGAGNDL
LVGDGGNDILIGGAGDDLLYGESDFTQTIPGDDWLDGGEGNDRLFGGAGADSLSGGDGDD
LLIGDFSEDPGSADILDGGAGADELQGGGGDDILYGGIGMDRLAGFAGNDVLDGGADSDE
LQGGAGDDSLWGGLGHDLLTGQEGDDELFGDDGNDELHGETGNDTLLGGVGNDALFGQDD
DDFLSGDAGDDVLNGGLGNDQLDGGDGIDDVQGREGDDLIVGGIGDDFLYGDGNNPTVLN
LLGGNDTLDGEEGDDQLWGGAGQDQLFGGEGTDQLVGDVGDDALFGDAGDDSLFGDSPLF
AGQAGNDVLDGGDGNDVLDAGGGEDDLHGGAGNDRLIGGAGSDTYRFNLGDGVDSIEDDA
TQSNRLVFGAGITAESLSLDVAPNDSLVVRVGNSEDAVQIAGFGLNSPSEFHTINQFEFA
DGTVLTDAGLLARGFNLSAPVDGGTMIGTSFADHMQGSQAADWLHGRDGNDVLIGGEGAD
VLEGEEGDDLLDGGAGSDRLYGGAGVNVLRGGAGSDLLVSNAVDDQLLGGTGDDIYHLAS
VLTTVSEDANAGVDTIHLAPSASLVFQAPDQVENVQILDDFYLESTQRVDLVGNVLDNQL
SGPNQLDGQGGNDILIGVGDNTFLFDRGYGQDIVRMGMQTYAHSGLDQVLFGAEIAPGDL
VLENHANDLIVKVNGSTDQLTVESFFVSSSNHVDQFAFLDGSVWDLSAIESRVLTFVGSD
TDDTFYGNDGDNLIRGLGGNDQIRASLGDDTLDGGAGNDFLEGYVGNDIYLFGRGYGQDS
IDDQGDSSDVDTLQLLEGVGPGDLTLRATPDFGTGVILTITNTADQLMLGGFFASASLRV
DLIKFADGTIWDYNAMLAQTEGVNLVGGEDVDYLYGNVTNDILSGLGGDDSLYGGAGNDL
LDGGIGADGMIGGSGNDLYTVDEVGDGVTEQAGQGTDTVQSSVTYALGANVENLTLIGNA
AINGSGNSLNNILAGNGAVNVLTGGAGNDTYVVGAGDTIVEAAGSGTDIIRADISWTLGI
NVENLVLTGTAAVNGTGNSLANTLTGNSAANILNGGAGADRLIGGQGDDTYVVDNVSDQI
TESANEGLDTVQSSVTYTLAANVENLTLTGSGSINGTGNGLDNILVGNSAANRLTGGAGN
DTYVIGTGDSIVESVNGGIDSVQSSVTHTLAANVENLTLTGSATINGTGNGLNNILIGNS
AVNTLTGGAGNDTYIVGAGDTVVEASNAGTDTVQSAVTWSLGANVENLALVGSAAVNGTG
NTLANVLTGNAGNNALIGGDGNDTMAGERGNDVLNGGTGNDVFQFARGDGQDTVSDTSGS
RDRLNFGSGINPLDIMLSQSANDLRIALYGSTDQVTIANWYGGATNQIETVQAGNGQQLM
STQVNQLIQAMAGFTQQTGLSWEQAVAQRPQDVQQVLAANWH
NT seq
7329 nt
NT seq
+upstream
nt +downstream
nt
atgggtacctggctccgtttcgcactacagcagattgccgctgagagctattttgactgg
attgatctatcaaaccctcaacgggtaatcggccaacttcaacttggaaacaacaatgta
actggcgatgatccgacggcacccgtgttgcctggtaaaatccggatgacgacgctgcag
gctgagcaatttgtccagcgctatcagatcgtcgatcatcacgccaacgatgcaactggg
tttagtgccaccctgctagtcgataccgagaccaatagctacacgctttcatttcgaagc
agtgagtatgccgctgacgtcaatggtggtgatcgttcacgcgatattttgggggcggat
gcagaagtcaagaattccggctttgcgtttgcccaacttgtcagcatgacgcgatacttt
gagggcttgcaacagggcaagaggagcgatgggacgatcgatccgtcattggctgccttc
tttggcaattctcagaaccaacttaatgtcactggctattccctcggagggcacctagcg
accgtattcacagaactctatgcggatcgcgtggctcaaacgtatacattcaacggagcc
gggcgaggcgaatttggtagtgtgcagctcaatggcgaggcgcaagaggcagagcgcata
cgggagatgcttgcgaatcttgattcgcgattacggacaactgatccgttgggatcgctg
ttcgtcagtggggcgacgggtgacatttatactgatgagcggtatgtggtcgccctcgat
gctacccaaattttatatccgacgagtggaactcaaattctgcctggcctgacaggaggg
ataacgagaaccgatggagcttttgggaaaatacagcagatctttggtcatgccgatacc
ggtcaggatgttgaggtggtggccaattctggggtccacgcaaaggcgattcaggttcta
atcgaagggcagccactagtcgaagatgtgaatatccagaatccgtgggaatcgcagtat
ggcaatagccacagtattgccctcatcgtggattcgcttgccattcaggaactgtttcaa
aaagcggatccacagctgcagcaagcccagatagaaagtatcttgaaggcgtcatcaggt
caggttgccattccttatccagaacagggaatgcctgtgccccttgccgagggggacact
cttgaaaaagcgctcgatgccttagcaagggtgttccatgtcgatggagttgctactccc
ttcgggcgtctgcccggcgacttcggcagcttaacatatcgacagccgttttatgagcga
cttgaggcagttcgaactgcgattggtcatcaggtgttgagcattgtgccattgatgggg
aagagcgctgaggagttacaaaccctcgcctcactggagagctcgacgagtcttgcctat
cggttcgcattaagggagttaaccccttttgcggtcctcggcgctagcgcttcctcaaca
gaggcactttatgcaagccataatgaagccggagaattggctctagtcaatcctgaaagc
ggaataggcgaattgtcctcgcagtacttgaaggatcgcgccgcatttctgatcgagaag
atcaatgtcaacagtagcccaatcggtctcccctccgtcactcattttaaagatttccaa
tcatcatacgagattggttcggcaacactcccgctgccccaagttctgtttggagacgaa
gtcggcgaaactctcgatggaagtgtatttcggggagatcatctctacggcggtgatgga
aatgatcatctatttggctatggaggcaaagactatctggaggggaatcgcggcaacgac
attctggatggcggaagtggcgccgatactatactgggaggaacgggagacgacacgtat
ctcgtcgacgattctggtgatatcgttcgagagtatgccaatagcggtgttgacgaagtg
cgcagttcagtcaccttcaccctggactcccagatcgagtacctcacgctgacgggctct
aatgccattgatggcatcggcaacgaactaggcaatattctcatcggcaacagcgccaaa
aatgtgctgaatggtggagatgggcaggaccatctcgtcggcaacgagggaaatgacaca
ctcatcggcggcgctggcaacagcgatctcctcgaaggcggcgtcggattcgatacgtat
atctatcgctctggtgacggggtggatcgaattgaagacagcgatgtgcaggggcagatc
attttcgatgaccacttgttgcaaggcgggattcgtcgcgctggtgatgccgccaacagt
tatacaagcctggatggccgaaccacttacatgatgtccgggaccgatctcatcgtgaac
ggggtcctcatcgtgaatgagaatttccagagtggtcaaatggggattcaattgcgcgat
gtctctcctattccgactgatacgggacttcctgcaggaccttttgggcatgtgctggag
ggagggagtggggatgagacgctcattgccaccaatccgtattcgtacgccatgtatggc
aacgaaggagatgatgtcctcacttctcaagtgccgtccatacatgactcgttctctgat
cttcgtgatggtggggccggtgatgacatcttagttggtgctggagggaatgattatctc
gttgggggtagcggtgatgattatgctgatgtctccgatggggatatctttttcggtgga
gatggcaatgacattgctgtgactgataccgagatagccaactacgcatggacccatatc
ggcagcggcacacactatattgacgggggcgctggcaatgacgtgttattgggcgccctt
ggcgttgatgtgctgcttggtggggagggtgaggatgttcttaggggagagaaccgtcct
gcgggttggattgcgaaagtatacgacgttgatcttatcccgcaaagttttcctatgccg
gcattttcctccgctctaggtgcggacgactatctcgatggaggcgcaggtaacgacctg
cttgtcggcgatggaggaaacgacattctcatcggcggggcgggcgacgacttgctgtat
ggtgagtcggatttcacccagactattcctggcgatgattggttggatggtggtgagggc
aatgaccggctattcggcggcgcaggagctgactctctttccggtggggatggcgacgat
cttttgatcggggatttttcagaggatcccgggtctgcggatattctcgatggcggtgcc
ggagccgacgaactgcagggtggagggggcgacgatattctgtatggtggcatcggaatg
gatcggctcgctgggttcgccgggaacgatgtgctcgatgggggggcggacagcgatgag
ctacagggcggggccggcgacgactcattgtggggcggacttggtcatgatcttctgacc
gggcaggagggagatgacgagctcttcggggatgatggaaacgatgagctgcatggagag
actggcaacgatacgcttttgggtggcgtcggcaatgatgcgctctttggtcaggatgat
gacgacttcctttccggcgatgccggtgatgatgtattgaatggcggactcggtaatgat
cagcttgatggcggcgatgggatcgacgatgtgcagggccgagagggagacgatctcatt
gttggcggcatcggcgacgacttcctctacggtgatggcaacaaccccactgtcctgaat
cttctcggtggcaacgatactctggatggcgaggagggggatgatcagttgtggggcggt
gcgggacaggatcaactgttcggtggcgagggaaccgaccagttggtgggtgatgtggga
gatgatgccttgttcggggatgccggtgatgactctctctttggagactcgccgctattt
gcgggacaggcagggaatgatgtgctcgatggcggtgatggcaatgacgtccttgatgca
ggtggcggggaggatgatctgcatggcggggcaggaaatgatcggctgatcggcggggct
gggagtgacacatatcgatttaacctgggggacggtgttgactctatcgaggatgatgca
acgcagagcaatcgattggtctttggcgctggtattaccgctgaatccctgagtttggac
gtggcacccaatgattcccttgtcgtccgtgtcggtaacagtgaggacgcggttcaaatc
gcgggctttgggctgaattcaccctccgagtttcacaccattaatcagttcgagtttgcc
gatggcacggtgctgacggacgccggattgctcgcgcgcgggtttaacttgtccgcacca
gtggacggaggaacgatgatcggcacgtcctttgccgaccatatgcaaggcagtcaggct
gctgattggctccacggacgtgatggaaacgatgtcctcattggcggcgagggcgctgat
gtgttggagggtgaggagggcgacgatctactggatggtggggcaggaagcgatcggttg
tatggtggggcaggcgtcaatgtcctacgcggtggtgccggaagcgacctgttggtgtcg
aacgcggtcgacgatcagttactcggtgggaccggtgacgatatctatcaccttgcctca
gtacttaccaccgtgtcagaggatgcgaatgcgggcgttgataccatccacctggcgccc
agtgcttctcttgtatttcaagcgcctgaccaggtggagaatgttcagatcctggacgat
ttttatttggagtcgacccagcgagtggacctggtaggaaatgtgttggataaccaattg
tccggtcccaaccagcttgacggccagggaggaaacgacattctcatcggggtgggcgac
aatacgttcttgtttgaccgtgggtacgggcaagacatcgtacggatgggcatgcagacg
tatgcccactcagggctcgatcaggtattgttcggagcggagatcgcgccgggcgatctt
gtgctcgaaaatcatgccaacgatctaatcgttaaggtcaatgggagcacagaccaattg
acggtggagtccttttttgtctcctcaagcaatcacgtggaccaatttgcgtttctcgat
gggtccgtgtgggatctgagcgcgattgagagtagggtgttgacgtttgtcggcagtgac
accgacgacacgttctatggcaatgacggggacaatctcattcgtgggttggggggtaat
gatcaaatccgggcttcgctcggtgacgatactttggatggtggagccggaaacgatttt
ctggagggctatgttggtaatgacatctatctatttggtcgaggatatgggcaagactcc
atcgacgatcaaggcgattcatcggatgtcgacacgctgcaactcttggaaggggtcggc
cctggggatctcacattgcgtgcgacccctgatttcggtaccggtgtaattctgactata
acgaataccgccgatcagctcatgctcggcggatttttcgcgtctgcgtcactccgtgtt
gatctgatcaaattcgcagacggcactatttgggattataacgcgatgctggctcagact
gaaggcgtgaatctcgtcggcggtgaggatgtcgattacctctacggcaatgtcacgaac
gacattctttcaggattgggtggagatgacagcctctatggcggggccggcaacgacctg
ttggacggggggattggtgcggatggcatgatcggcggatcagggaatgatctttatacg
gtcgatgaggttggcgatggcgtcacggaacaggcaggacaaggaacggatacggtccag
agcagcgtcacgtatgcgctgggtgcgaacgtcgaaaatcttacgcttatcggcaatgcg
gccattaacggcagtggaaactccctcaacaatatcttggccggcaatggtgcggtcaat
gttctcactgggggtgcaggaaatgatacgtatgtcgtgggggcgggggatacgattgtc
gaagccgcaggctcagggactgacatcatccgagccgatatcagctggacattgggaatc
aatgtggaaaaccttgtcttgacgggaactgccgcagtcaatggaaccggcaacagcctc
gccaacacactaaccgggaacagcgccgctaatattctcaatggcggagccggtgcggat
aggttgatcggcgggcagggcgacgacacctatgttgtggacaacgttagcgatcagatt
actgagtcggctaatgaaggtctcgacaccgttcagagttcggtgacgtataccttggcg
gccaatgtggagaacctcacgctgaccgggagcggttccatcaatgggaccggaaacgga
ttggacaatattctggtcggtaacagtgcggccaatcgactcactggcggtgccgggaac
gacacctatgtgatcgggaccggcgacagtatcgttgaatcggtgaatggcggtattgac
tcagtccagagtagtgtcacgcacacgcttgccgcaaatgtcgagaatctgacgcttacg
ggaagtgctaccatcaacggtactgggaatgggctcaataacatcttgatcggcaatagt
gcagtcaacacgctgaccggtggggcggggaacgacacatatattgtgggagcaggagat
actgtggtggaggcatcgaatgccggcaccgacacggttcagagcgccgtaacctggagt
ttaggagccaatgtggaaaatctggcactggtcggatctgcggcggtcaacgggacgggc
aatactctggccaatgtgctcaccggcaatgccggtaataatgcactgatcggcggtgac
ggcaacgataccatggcaggtgaacgaggaaacgatgtgctcaatggcgggactggaaat
gatgtctttcaattcgctcgcggcgatggacaggatactgtctctgacacgagcgggagc
agggatcggcttaacttcggttccggaatcaatcctctggacattatgttgagtcaaagt
gccaatgatttgcgcatcgcgctctacggttcgaccgatcaggtgacgattgccaactgg
tatgggggcgctactaatcagatcgagacagtccaagccggtaacggtcaacaattgatg
agcactcaggtgaaccaattgatccaggcgatggcaggattcacgcaacagaccgggttg
agttgggagcaagccgtggcccagcgtccccaggatgtgcagcaggtcctggctgcaaat
tggcactag
DBGET
integrated database retrieval system
