Nitrospira defluvii: NIDE3457
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Entry
NIDE3457 CDS
T01281
Symbol
hlyB
Name
(GenBank) Type I secretion system ATPase HlyB
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
nde
Nitrospira defluvii
Pathway
nde02010
ABC transporters
nde03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIDE3457 (hlyB)
03070 Bacterial secretion system
NIDE3457 (hlyB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE3457 (hlyB)
02044 Secretion system [BR:
nde02044
]
NIDE3457 (hlyB)
Transporters [BR:
nde02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIDE3457 (hlyB)
Secretion system [BR:
nde02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIDE3457 (hlyB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_29
ABC_ATPase
Zeta_toxin
MeaB
NB-ARC
AAA_22
PRK
G-alpha
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CBK43143
UniProt:
D8PIQ6
LinkDB
All DBs
Position
complement(3451282..3453450)
Genome browser
AA seq
722 aa
AA seq
DB search
MDTLTSNPADCSVPSPITDTGLLCLLMVAKFHDLPVDGGQIQHQFGQSGKVLATQELLRA
AKHIGFRVGLVTARCEGLATTPLPAIVERIDGRYVVLAKVQDDKVLIHDPLEARSLVQSR
ETFVTTWSGRLLLCAKRAGLRAQDLAFDITWFIPAVLKYRQLLGEVLLASFFLQLFALLT
PLFTQVVIDKVLVHKGFTTLHVVAIGMLALALFDGLLGGLRTYLFAHTTNRIDVSLGAQL
FRHLLALPLAYFESRRVGDTVARVRELEHIRQFLTSNSVTVLLDGVFIVVFLAVMWLYSS
MLTLVVMASLPLYAILSIAITPTIRTRLNEKFNRGAENQSFLVETVGGIQTVKALAVEPP
LQRRWDEQLAGYVQASFRATSLITIAGQLATFIQKTTTIAVMWVGAYQVIEGVLSIGELI
AFNMISGQVTGPLLRMVNLWQEFQQVGISIQRLGDVLNTRPEPTYSSARTTLPRIAGQIT
FDDVTFRYRPDGRPVLQQVSFSLQPGQVIGMVGRSGSGKSTIAKLMQRLYVPERGRVLVD
GVDLAQVDPAWLRRQVGVVLQENFLFNRSVRDNIALTDPGLSMDRVMHASKLAGAHEFIL
ELPDGYDTIVGEHGCALSGGQRQRIAIARALVANPRILIFDEATSALDYESEAIIQRNMA
QICKGRTVIVIAHRLSTVRPAHRIYVLDKGQIFEDGTHDDLIKRNGMYARLYRYQDGRSA
AA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatacattgacatccaatcccgcggattgctccgtgccaagtcccataacggatacg
ggcttgttatgcctgctcatggtcgccaagttccatgacctacctgtggatgggggacag
attcagcatcagttcgggcagtcgggcaaggtgctggcgacgcaggagttgctacgcgca
gccaaacacattgggtttcgagtcggacttgtgactgctcgatgcgaggggctggcgaca
acgccattaccggccattgtcgaacgaatcgacgggagatacgtcgtcctggccaaagta
caggacgacaaggtgctcatccacgatccattggaggcgcgatcgctggttcaatcgaga
gagacgttcgtcacaacttggagcggcaggttgctactctgtgcgaaacgcgcgggcctc
cgggcgcaggatcttgcgttcgacatcacctggttcattccagcggtactcaagtatcgg
cagctgctgggcgaagtgttgttggcgtccttttttctgcagctctttgcattgctcact
ccgttgttcacccaagtcgttatcgataaagttttagtgcacaagggcttcacgacgttg
catgttgtagccatcggtatgctggcgttggcactattcgacggacttcttggcgggttg
cgtacctatctgtttgctcacaccacgaaccggatcgatgtgagtttgggggcgcaactg
ttccggcatcttttggccctccctctcgcctactttgaatcacgccgggtcggcgatacg
gtcgcacgcgtgcgcgaactcgaacatatccgtcaatttctcaccagtaattcggtgaca
gtcctgctggatggcgtgttcatcgtcgtgtttctcgctgtgatgtggctctatagttcg
atgttgacgttggtggtgatggcatcactgccgctctatgccattctctcgatcgccatt
acgccgacgattcgcaccaggctcaatgagaagtttaaccgcggagcggagaaccaatca
tttctagtcgagaccgtaggcggtattcagaccgtgaaggctctggccgtcgagccaccg
ttgcagcgccgctgggacgaacaattggccggatacgtgcaggccagtttccgtgcgacc
agtctgatcaccatagccggccagctggctacgttcatccagaaaactacgactattgcc
gtgatgtgggttggtgcgtatcaggtcatcgagggggtgctcagtatcggcgaactgatc
gcctttaacatgatctccgggcaggtgaccgggcccttgttgcgtatggtgaacctctgg
caggagtttcaacaggtcggcatctcaatacaacgcctgggcgatgtgttgaacaccagg
ccagaacctacatatagctcggcccgcacaacgttgccgcggattgccgggcagattacg
ttcgacgacgtcacctttcgctatcgtccggatggccggccggtgctccagcaggtttcc
ttctccctccagccgggccaggttattgggatggtgggacgatccgggtcgggcaaaagc
accatcgcgaagctgatgcaacggttgtatgtgccggaacgcggccgtgtgctggttgat
ggggtagatcttgcgcaggtcgatccggcctggttgcgtcggcaagttggcgtggtactg
caggagaactttcttttcaatcgctccgtccgggacaacatcgcattgaccgacccaggg
ctctcaatggaccgtgtgatgcatgcgtccaaactggccggtgcccacgagtttatcctg
gagcttccggacggatatgacacgattgtgggagagcatggctgcgccctctccggcggg
caacgtcagcgtatcgccattgctcgtgctctcgttgcgaatcctcgcattctgatcttt
gacgaagccactagcgctctggattatgaatccgaagcaatcattcaacggaacatggcg
cagatctgcaaggggcgcaccgtcatcgtcattgcacatcgcctgagcacggttcgccct
gcccatcggatttacgtcctcgacaaggggcagattttcgaggacgggacgcacgatgat
ctgatcaagcgcaacgggatgtatgcgcgactttatcgatatcaggacgggcgatccgca
gcagcgtaa
DBGET
integrated database retrieval system
