Nitrospira defluvii: NIDE3527
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Entry
NIDE3527 CDS
T01281
Symbol
mdtC
Name
(GenBank) Multidrug efflux system, subunit C
KO
K07789
multidrug efflux pump
Organism
nde
Nitrospira defluvii
Pathway
nde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NIDE3527 (mdtC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE3527 (mdtC)
Transporters [BR:
nde02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NIDE3527 (mdtC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
CBK43212
UniProt:
D8PIX5
LinkDB
All DBs
Position
complement(3534042..3537143)
Genome browser
AA seq
1033 aa
AA seq
DB search
MNLSAPFVRRPVATTLLTIGATLVGIVAFQFLPVASLPQVEFPTINVSASLPGASPETMA
SSVAAPLERQFTRIAGVTEMTSSSTIGGTNVTLQFELSRDIDGAARDVQAAINAARADLP
SNLPTVPRYSKVNPADGPILILALTSELVSRGQMYDAASSILQQKLSQVEGVGQVAVGGG
SLPAIRVDLNPTALNKYGIGLGDVRQVLTSTNVNRPKGQLTGDERTWEIRTNDQLRQAEE
YLPLIVAYRNGRAVQLSDVASVETSVEDLRTMGVANGTPAVLVIIYRQAGANIIETVDRL
RAQLPQLEASLPGSMSLSIVMDRTPVIRASLHDVERTLAISVGLVILVVFVFLRNLRATL
IPAVAVPVSLISTFGVMYLFGYSLDNLSLMALTIATGFVVDDAIVVLENITRYREQGLSP
VDAALRGAKEIAFTVVSMTLSLVAVFIPIFLMGGMLGRLFREFAVTLSTAILVSLVVSLT
TIPMLCARVLKSEPRDTHGWWYRVSERGFGWLSRGYATSLAWVLRHPRTMLVVTLGTMAL
TVYLYILVPKGFFPQQDTGRLFGNIQAAQDISFQAMRQKLTDVVDIIKSDPAVASITGFT
GGGSHAGTTNTGRMFIALKPLEERGISSDEVIARLRPKLAKVPGAPTYLQAIQDLRIGGR
ASSAQYQYTLQSVDLAELNTWAPKVEAKLRTVPEIVDVNSDQQDRGQQSLVVFDRVTASR
LGLSPQLIDDTLYDAFGQRQVSIMYTPLNQYHVVMEVAPQYWQNPSALHDIYVRSPNGGQ
VPLSAVTRYEPANTILSVNHQGQFPAVTLSFNMAPGASLGQAVLAVDQAMHDIGLPATVR
GTFQGTAKAFQSSVENQPWLILAALVTVYIVLGILYESYIHPITILSTLPSAGVGALLAL
LLFKTELSMIALIGIMLLIGIVKKNAIMMIDFALHSERMVEGKTPQEAIYEACLLRFRPI
MMTTAAALLGALPLAVGMGVGSELRRPLGIAIVGGLLVSQMLTLYTTPVVYLFLDRLRLR
WVRARAAALHPAA
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtctgcgccctttgtgcgacggccggtcgccacgacgttgctcaccattgga
gcgacgctggtgggcatcgtcgcgtttcaattcctgcctgtggcctctctcccgcaagtc
gaatttcccacgatcaatgtgtcggcctcgctgccgggggcgagccccgagacgatggcc
tcgtccgtcgccgcgccgttggagcgccagttcacccgtatcgcgggcgtgacggagatg
acctcttcgagcacgatcggcgggaccaacgtcacgcttcaattcgagctgagccgcgat
atcgacggggcagcgcgggacgtgcaagccgccatcaatgcggctcgcgccgatctgccg
tcgaatctgccgaccgttccacggtacagcaaggtgaatccggccgacggccccattctc
atcctcgccttgacgtccgaactcgtgagtcgcgggcagatgtacgatgccgcctccagc
atcctgcagcagaaactgtcgcaggtcgaaggcgtcgggcaggtcgccgtgggaggcggg
tctttgccggcgatccgggtggatctcaatccgaccgctttgaataagtacggcattgga
ctcggagacgtgcgccaggtcctgaccagtacgaacgtgaatcggccgaaggggcagctg
accggagacgaacgcacctgggaaatccgcaccaacgaccaactccgacaggcggaggag
tatctgccgttgatcgtggcctatcgaaacgggcgggcggtgcagctgtccgatgtagcc
tcggtggaaacgtctgtcgaagatctccggaccatgggggtggcaaacgggaccccggcg
gtgctggtgatcatttatcgccaagcgggcgccaacatcatcgaaacggtcgatcggttg
cgtgcgcaactccctcaattggaggcctcgctgccggggagtatgtcgctgtcgattgtc
atggaccgcacgcccgtcatccgcgcctcgctgcacgacgtcgagcgcactctggccatt
tccgtcggactggtcattctggtggtgttcgtgtttctcaggaatctgcgcgccaccttg
attccggcggtggcggttccggtctcgctgatttccacgttcggcgtgatgtacctgttc
gggtatagcctcgacaatctctccctcatggcgctcacgatcgccaccggctttgtggtg
gacgatgcgatcgtggtgctcgaaaacatcacgcggtatcgcgagcaggggctgtcgccg
gtggacgcggcgctccgcggtgcgaaggagattgcgtttacggtcgtgtcgatgaccctc
tcgttggtggcggtgttcatcccgatctttttgatgggcggcatgctcggccggctgttt
cgtgaatttgcggtgacgctctcgaccgccattctggtgtcgttggtggtgtcgctcacg
acgattccgatgctctgcgcgcgggtgttgaagtcggagccgagggatactcatggctgg
tggtatcgcgtcagcgagcgggggttcggttggttgtcccgcggatatgcgaccagcctg
gcctgggtcctccgccatccgcgtacgatgttggtggtgacgttgggcactatggcgctc
acggtgtatttgtatatcctcgtgccgaaaggatttttccctcagcaggacacgggccgg
cttttcggaaatattcaggccgcgcaggacatctcgtttcaggcgatgcgtcagaaattg
accgacgtggtggacatcatcaagagcgatcccgccgtcgccagcatcaccggctttacc
ggaggcggcagccatgccggcaccaccaatacaggacgcatgttcatcgcgctcaagccg
ctggaagagcgagggatcagctcggacgaagtgatcgcccggttgcgccccaagttggcg
aaggtgccgggagcgccgacctatctgcaggccattcaggatttgcgtatcggcggtcgg
gcgagcagcgcacaatatcaatataccctgcagagtgtggatctggccgaactcaacacc
tgggctccgaaggtcgaggccaagttgcggacggtcccggagatcgtggatgtgaacagc
gatcagcaggatcgggggcagcaatcgctggtggtcttcgaccgggtcacggcatcgcgg
ctcggcttaagtcctcaattgatcgacgacacgctctacgatgccttcggccagcggcag
gtctcgatcatgtataccccgctcaatcagtaccatgtggtgatggaggtggcgccgcaa
tattggcagaacccctccgcgttgcatgatatttacgtccgctcgccgaacggcggacaa
gtgccattgagtgccgtgacgcgatatgagccggccaacacaatcctctcggtgaatcac
caggggcagtttcccgccgtgacgttgtcgttcaacatggcgccgggcgcatcgctcggg
caggctgtgctcgctgtcgatcaggcgatgcatgacatcggcctgcccgcgactgtgcgc
ggcacttttcaaggcacggcgaaggcctttcaatcgtccgtcgagaatcaaccctggctg
atcctggcggcgctcgttacggtgtacatcgtgctggggattctctacgagagttacatc
cacccgatcacaattctctcgacgctgccctccgccggtgtcggcgcgttgctggccctg
ctcctgttcaagacggagctgagcatgatcgcgttgatcgggatcatgttgctgatcggc
atcgtgaaaaagaacgccatcatgatgatcgacttcgcgttgcacagcgaacggatggtg
gaagggaagactccccaggaagcgatttacgaagcctgcctgctgcggttccgcccgatc
atgatgacgaccgccgcagccctgctgggcgcactccctctggccgtgggcatgggggtg
ggatcggagttgcggcgtcccctcggcattgcgatcgtcggcggcctgctcgtgagccag
atgctgacgctctatacgactcccgtcgtctacctcttcctcgatcgcctgaggcttcga
tgggtacgagcccgggcggccgctctgcaccctgccgcatga
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