Nitrospira defluvii: NIDE3570
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Entry
NIDE3570 CDS
T01281
Name
(GenBank) putative Hybrid sensor histidine kinase
KO
K13587
two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:
2.7.13.3
]
Organism
nde
Nitrospira defluvii
Pathway
nde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NIDE3570
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nde01001
]
NIDE3570
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
nde02022
]
NIDE3570
Enzymes [BR:
nde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
NIDE3570
Protein kinases [BR:
nde01001
]
Histidine kinases
Cell cycle family [OT]
NIDE3570
Two-component system [BR:
nde02022
]
Cell cycle family
CckA-CtrA/CpdR (cell cycle control)
NIDE3570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
PAS
GAF_2
PAS_9
HisKA
PAS_4
bHLH-MYC_N
dCache_1
PAS_8
GAF
MCP-like_PDC_1
HPTransfase
PAS_3
HATPase_c_5
GAF_NLP
Motif
Other DBs
NCBI-ProteinID:
CBK43254
UniProt:
D8PJ17
LinkDB
All DBs
Position
complement(3572229..3575330)
Genome browser
AA seq
1033 aa
AA seq
DB search
MAVSLPAGSPRRSYPWLPVLIVGVTIVALVIGVVMLRSIEVRMVEATGENLTLASAEIAD
KLDRLLFERHADVRMMARAFSDRALDKKYINEYLQWMKETYAPVYLWLGVTDAHGRMVAA
TDSAVIGQDYSRSGWFDRVRQTGTVQVDEVEIHESNHKIESVAFTAPILSVGGQFLGAVT
TRIGLPMLEDVLIETVREIQQTDGSAGPFEYQFLTKAGVVFVDSAFSGIDRVNLTELGLP
SVLLSRSGKAGYVEEMHARRRVPVVTGYSQTKGYGDYSGLQWTILLRMDRDLILLPIRAM
MWKLGMAGVVVWLPMVGLLLWATGRLREQHRQAQQESEWARAAEAALLQSQERNRVIVDT
ALDAVISMDAGGIITDWNAQAVNIFGWEREEALGRRVSETVIPVRDREAHERGLRHFLDT
GQGALLNRRIEMMGSHRDGHEFPVEITISPARLGDAYIFSAFIRDITARKRTERQLASQY
AVTRVLAESRTLEEAGPKILQAICESLEWELGIFWRLDRQGSVLRCLDVWQSPALNAEEF
VLDTWQHTFTIGKGLPGRIWQAGEPTWIKDVVQEANFPRGGAAARVGLHGAFGFPVRVGT
EVEGVIELFRREIKQPDEQLLKMVADVGLKIGQFGERARAEDALRRTEAQLQQSQKMEAV
GRLAGGVAHDFNNMLTVIRGYSELVLSRLAPTDGFRKELEEVKKAADRASGLTGQLLAFS
RRQFIAPKVLDLNSVIHNMEGMLRRLLGEDIVELCTVLDPGLGQLKADPGQVEQVIMNLA
VNARDAMPNGGRLTVETSNVQFGQRRNRPPMGAEPGSYVALIVRDTGHGMDEDTQSHVFE
PFFTTKEKGKGTGLGLSTVYGIVKQSGGCIEVESKPGRGATFKIYFPRVESAATETESVA
VGGDSVRGRETVLLVEDEPGVRRLVNETLRLHGYTVLEARHGIEALLTGAKHAGPIHLLL
TDVVMPQMSGPEVAEKLATVRPEVKVLYMSGYPDHPAFSKGGIDTEHSFLQKPFTPTTLA
QKVREVLDGSKVA
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggccgtttcccttcctgccggttccccgcgtcggtcctatccctggttacctgtcctg
atcgtcggcgtgaccattgtggcgcttgtgatcggtgtggtgatgctccgctccattgaa
gtgcgaatggtcgaggcgaccggagaaaatctcacgctggcctccgcggaaattgcggac
aaactcgatcggttgttgttcgaacgccatgcggatgttcgtatgatggctcgggccttt
tccgatcgcgccctcgataaaaaatacatcaacgaatatctgcagtggatgaaggaaacc
tatgcgccggtctatctttggctgggtgtgacggacgcccatgggcgtatggtggcggcg
acggactccgccgtgatcggtcaggactatagccggagcggctggttcgaccgggtgcgg
cagaccggaaccgtgcaggtagacgaagtcgagatccatgaatcgaatcataagatcgag
tcggtggcctttacggcccccattctgagtgtcggcggccagtttctcggtgccgtgacg
actcgcatcgggctgccgatgttggaagatgtcctcattgaaacggtccgtgaaattcaa
caaaccgacggctccgccggccccttcgagtatcaatttctgacgaaagccggtgtcgtg
tttgtggattcggctttttccggcatcgatcgggtgaatctcacggaactagggttgccc
tcggtgctgttgagccggtccggcaaggcgggatacgtcgaagaaatgcatgctcgccgt
cgcgtaccggtcgtcacgggttattcccaaaccaaggggtatggcgactattccgggttg
cagtggacgatcctgctgcggatggatcgggacctcattctcctgccgattcgagccatg
atgtggaaactgggcatggccggtgtcgtcgtctggcttccgatggtcggactgttgctc
tgggccaccggtcgattgcgtgaacagcatcgccaggcacagcaggaaagtgaatgggcg
cgtgccgcggaggccgcgttgctgcagagtcaggaacgcaaccgggttatcgtcgatacg
gcgctggacgccgtgatttctatggatgcgggcggcatcattacggattggaatgcgcag
gcggtcaatattttcggctgggagcgggaggaagcgctcggccgccgcgtgtccgaaacg
gtgattcctgtgcgcgatcgggaggcgcatgagcgcgggttgcgccatttcctggacacc
gggcagggcgcactcctcaatcgacggattgagatgatgggatctcaccgcgacggtcat
gagtttcccgtcgaaatcaccatttctcccgcccggctgggcgatgcctatattttcagc
gcgttcatccgggatattacggctcgaaaacgtaccgagcgtcaactcgcgtctcagtac
gcggtcacgcgcgtcttggcggaatcgcggacgctggaagaagcggggccgaagattctg
caggccatctgcgaaagtctcgaatgggagttggggatattctggcgcctcgatcggcag
ggcagtgtgctgcgttgtctggatgtctggcagtcgcccgcattgaacgccgaagagttt
gtgttggacacctggcaacatacctttacgatcggcaagggactccccggacggatttgg
caggccggtgaaccgacctggatcaaagacgtggtgcaggaggccaatttccctcgcggt
ggtgccgccgccagagtggggttgcacggagccttcggatttcccgttcgggtcggcacc
gaagtggagggtgtgatcgagttgttccggcgcgagatcaagcagccggacgagcagctg
ttgaagatggtggccgacgtcggactgaaaatcggccagttcggcgaacgcgcgcgggcg
gaggatgcgttgcggcgcaccgaagcgcagctccagcagtcgcaaaaaatggaagccgtc
ggacggttggccggcggtgtggcgcacgacttcaacaacatgctgacggtgattcgtggc
tacagcgaactggtgttgagccgcctggcgcccacggatggattccggaaggaactggag
gaagtgaagaaggcggcggatcgcgcctccggtctcaccggacagctgttggcgttcagt
cgccgccaattcattgcgccgaaagtgctggatctgaattcggtgatccacaatatggaa
ggcatgttgcgacggttgctgggcgaggacatcgtcgagctctgcacggtgctggatccg
gggctgggacagttgaaggcggatcccggtcaggtggagcaggtgatcatgaaccttgcg
gtgaatgcccgcgatgccatgccgaacggtggccgcctcacggtggagaccagcaatgtg
cagttcggacaacgcaggaaccgtccgccgatgggcgccgaacccggttcctatgtggcg
ttgatcgtgcgcgataccggccatggcatggacgaggatacgcagtcgcacgtcttcgag
ccgttttttacaaccaaagagaagggcaagggcacggggctcggtctttcgacggtctat
ggcatcgtcaagcaaagtggcggctgtatcgaggtcgagagcaagcccggacgcggggcg
acctttaagatttactttccgcgtgtggagtcggccgcaacggagaccgaatccgtcgcg
gtcggaggggactcggtcagagggcgcgagacggtcttgttggttgaggacgagcctggt
gtccggcggttggtcaatgaaacgctgcgcttgcatggatatacggtgctcgaggcccgg
catgggattgaagcgttgctcaccggcgccaaacatgccggtccgatacatttgctgctg
acggacgtggtcatgccgcagatgagcgggccggaagtcgccgaaaaactcgcgacggtt
cgtccggaggtcaaagtgctgtacatgtcgggctatccggatcacccggccttttccaag
ggggggatcgatactgagcattccttcctgcagaaacccttcacgcccacgacgctggcg
cagaaggttcgagaagtgctcgatggatcgaaagtcgcttga
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