Nitrospira defluvii: NIDE3591
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Entry
NIDE3591 CDS
T01281
Name
(GenBank) putative Penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
nde
Nitrospira defluvii
Pathway
nde00550
Peptidoglycan biosynthesis
nde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NIDE3591
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nde01003
]
NIDE3591
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nde01011
]
NIDE3591
Enzymes [BR:
nde01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NIDE3591
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NIDE3591
Glycosyltransferases [BR:
nde01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NIDE3591
Peptidoglycan biosynthesis and degradation proteins [BR:
nde01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NIDE3591
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PBP_1A_C
UB2H
UvrB_inter
MtrH
Motif
Other DBs
NCBI-ProteinID:
CBK43274
UniProt:
D8PJ37
LinkDB
All DBs
Position
complement(3593821..3596124)
Genome browser
AA seq
767 aa
AA seq
DB search
MVVMFVRRWMVRGLLVLAGVVVLAAGSAVAYGLYLSASLALPAGDEHPPRLIYGAPFLLK
PDLNIASAHLIERLNRLGYRSVETAVRTPGEYRVTPAGIDIYLHEFADFHLRPVPARLVL
DQGRVTKVLSIPGGDELFPAYLEPQLISGLRGASRQVREWVSYDDLSARFLDVLLAIEDR
RFFSHPGIDPIAVGRAVWTNVTRGTVIQGGSTITQQLAKNLFYSPQRTFGRKLKESMAAL
VLEAKYSKQAILESYANEIYLGQVGSVSIYGVGEAAHRYFGKRMDALSLEETALLVGMIK
GPNTYSPLRNPALAKQRRDVVLGRLHEQGLVSEDAWKQAVMMPVRVMPPQDTLADAPFFV
DHLLRQVEETTGAPLPDGVRAYTTLDPVLQRLATQTLESELGKLEAAYPALTGHSSPVQA
ALVALDPATGGILAMVGSRDYRTSQFNRAVQAKRQPGSLFKPLVYLAALEARRELTGGQP
ITAATSIVDEPVTFESGTGVWAPQNYDHRFHGTVSVRTAIEQSLNIPAVKIAQAVGTKRI
LQMAEKLGIRSPLADNLSIALGTSGVSLLEITSAYGALAQGGLYVAPSALQAVMTPEGDP
AWHHTPVRHQAVSPQAAYVMTSLLKGVVERGTAAKAKAMGLRGTVAGKTGTTDGYRDAWF
VGYTPDVVVGVWVGFDDEEALHLTGAQAALPMWVEFARRISPAATREFAMPPAVVTRDID
PQSAQLATSKCPQRSAELFIEGTEPSIYCEVHGSGFWERVKRGFGFS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
gtggtggtgatgttcgtcagacgctggatggtgcgggggcttctggtattggccggcgtc
gtggtccttgccgcaggaagcgcggtggcctacggactctacctctcggccagtctggcc
ttgccggccggcgacgagcatccccctcgcctgatctacggcgccccgtttctgttgaag
cccgatctgaatattgcctccgctcatctgatcgagcgcctcaaccggctcggctatcgc
tcggtcgagacggctgtgcgcacccccggcgagtatcgtgtcacccccgccggaatcgat
atctacttgcacgagtttgccgattttcacctgcgaccggttccggcccgtttggtgctc
gaccaggggcgagtgacgaaggtcctgtcgattccggggggcgacgagttatttcccgcc
tacctggaaccgcaattgatcagcgggttgcgcggcgcctcgcggcaggtgcgggaatgg
gtgtcgtatgacgatctgtcggcacgatttctcgatgtgttgctggcgatcgaagaccgg
cgattcttcagccatcccggcatcgatcccattgctgtcggtcgtgcggtctggacgaat
gtgacccgcggcacggtcatccagggcggcagtacgatcacgcagcaattggcgaagaac
ctgttttattctccgcaacgcacgttcgggcggaagctcaaggagtcgatggcggcattg
gtcctggaggcgaaatactccaaacaggcgatcctcgaaagttatgcgaacgagatttat
ctcgggcaggtcgggtcggtgtcgatttatggagtcggggaggccgcgcaccggtatttc
ggcaaacgcatggatgcattgagcttggaagagaccgcgctgctggtcggcatgatcaag
gggccgaatacctattcacccctccggaatccggcgctggcgaagcagcgtcgcgatgtc
gtcctgggccggttgcacgagcaggggctcgtgagcgaggacgcgtggaagcaggcggtg
atgatgcccgtcagggtgatgccgccgcaggacacgttggccgacgcgccgttttttgtc
gaccatctgttgagacaggtggaagagacgaccggtgcgccgttgccggacggcgtcagg
gcctacacgacgctcgaccctgtgttgcaacggctggccactcagacgctggagagtgaa
ctgggcaaactggaagcggcctatccggcgctgaccggccacagcagtccggtgcaagcc
gcgctggtggcgctcgatccggcaacgggcggcattctggcgatggtggggagccgcgac
tatcgcaccagccagttcaaccgggccgtgcaggcgaaacgccagcccggctcgttgttt
aagccgttggtgtatctcgccgcattggaagcccgtcgcgaattgaccggtggccaaccg
attacggcggcgacctcgatcgtcgatgaaccggtgacattcgaatcagggacgggtgtc
tgggcgccgcagaattacgaccatcggttccacggcacggtgtccgtgcggacggcgatc
gaacaatcgctgaatattcccgcggtgaagatcgcacaggcggtagggacgaagcggatt
cttcagatggcagagaagctggggattcgcagcccgctggccgacaatctgtccattgcg
ttgggaacttccggcgtctcgctgttggagatcacctcggcctacggggctctggcgcaa
ggcgggctctatgtggctccctcggcgttgcaggccgtgatgacccctgaaggggatccc
gcttggcatcatacgccggtacggcatcaagcggtgtcccctcaggcggcctatgtcatg
acctcgttgctcaagggtgtcgtcgagcgcggcacggcggccaaggcgaaggcgatgggc
ttgcgcgggaccgtggcgggaaagaccgggacgacggacgggtatcgcgacgcctggttt
gtcgggtacacgccggatgtggtggtcggcgtgtgggtgggattcgacgacgaggaggcg
ttgcacctgaccggagcgcaggcggcgctcccgatgtgggtggagttcgcgcgccggatc
tcaccggctgcgacgcgtgagtttgcgatgccgcctgccgtggtcacgcgcgacatcgat
ccccagtcggcccagttggcgacctcgaagtgtccgcagcggtcggcggagttgtttatc
gaaggtacggaaccttcgatctactgtgaagtgcacggcagcggattctgggaacgggtg
aagcgcggttttggtttttcctag
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