Nitrospira defluvii: NIDE3719
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Entry
NIDE3719 CDS
T01281
Symbol
tly
Name
(GenBank) Hemolysin TlyA-family protein
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nde03009
]
NIDE3719 (tly)
Enzymes [BR:
nde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
NIDE3719 (tly)
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
NIDE3719 (tly)
Ribosome biogenesis [BR:
nde03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NIDE3719 (tly)
23S rRNA modification factors
NIDE3719 (tly)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_11
TyrRSs_C
Methyltransf_23
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
CBK43397
UniProt:
D8P7Q1
LinkDB
All DBs
Position
complement(3701932..3702687)
Genome browser
AA seq
251 aa
AA seq
DB search
MSQKLRPERERLDRVLVSRGLVASREDAARLILAGLVRVDGVVVDKAAKPILSGAKVELT
GPGSPYVGRGGEKLAGALDQFQVDPKGMICFDVGCSTGGFTDCLLQRGAARVYAVDVGYG
QFEWRLRQDPRVVLMERTNIRYLEPGAIRDPIDLIVIDVSFISLILVLPCVVPYLTESGF
VITLIKPQFEVGKGLVGRGGIVRDDDLREGAADKVVACAQQLGLELAERMESPIEGRKGN
REILAWFRRRA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaattacgcccagagcgggaacggctggatcgcgtgctggtcagccgaggt
ttggtcgccagtcgggaagacgcggctcgactcatcctggccggcctcgtgcgtgtggac
ggggtggtggttgataaggcggcgaaaccgatcttgtcgggtgcgaaagtggagctgacc
gggcctgggtcgccctatgtcggtcgcggaggagagaagttagccggcgcgctggatcaa
tttcaggtcgatccgaaagggatgatctgcttcgacgtcgggtgttcgaccggaggattt
accgattgcctgctacagcgcggcgccgcacgcgtctatgcggtcgatgtggggtatggc
cagtttgagtggcgcttacggcaggacccgcgcgtggtgctcatggagcggaccaacatc
cggtatctcgagccgggtgccatccgggatccgatcgatctgattgtcatcgatgtgtcg
tttatctcgctgatcctggtgctgccctgtgttgtgccctacctcactgagtcggggttt
gtgatcacgttgatcaaaccgcagttcgaggtggggaaaggtcttgtcggacggggtgga
attgttcgtgacgatgacttgcgggaaggggcggccgacaaagtggtggcatgcgcgcag
cagttggggctggagctggcggagcgtatggaatcgcccatcgagggccgaaagggcaat
cgggaaatcttggcctggttccggcgcagggcgtga
DBGET
integrated database retrieval system
