Nitrospira defluvii: NIDE3720
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Entry
NIDE3720 CDS
T01281
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
nde
Nitrospira defluvii
Pathway
nde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NIDE3720 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nde03400
]
NIDE3720 (xseB)
Enzymes [BR:
nde01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NIDE3720 (xseB)
DNA repair and recombination proteins [BR:
nde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NIDE3720 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
CDH1_2_SANT_HL1
HIRA_B
Motif
Other DBs
NCBI-ProteinID:
CBK43398
UniProt:
D8P7Q2
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All DBs
Position
complement(3702754..3703002)
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AA seq
82 aa
AA seq
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MAAVKFEYAMARLETIVAELEKGDLPLDDSLKIFEEGIRLSKTCLKMLEDAERKVEILVQ
EKDGKKRIQAFSPGEDEPERPQ
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
gtggccgccgtgaaatttgaatatgcaatggcacgattggaaacgattgttgctgaactc
gaaaagggcgatcttcctctcgatgactcgctgaagattttcgaggaggggattcggttg
tccaagacctgcctgaagatgctggaggatgccgagcggaaggttgaaatcctggtgcaa
gagaaggacggcaagaagcggattcaagcgttttctcccggtgaggatgagccggagcgc
cctcagtaa
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