Nitrospira defluvii: NIDE3721
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Entry
NIDE3721 CDS
T01281
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
nde
Nitrospira defluvii
Pathway
nde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NIDE3721 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nde03400
]
NIDE3721 (xseA)
Enzymes [BR:
nde01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NIDE3721 (xseA)
DNA repair and recombination proteins [BR:
nde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NIDE3721 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
CEP104-like_TOG
TetR_C_24
Motif
Other DBs
NCBI-ProteinID:
CBK43399
UniProt:
D8P7Q3
LinkDB
All DBs
Position
complement(3703060..3704418)
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AA seq
452 aa
AA seq
DB search
MTGHTLPLPLLLSVSDVTRLIRDSLEAQFRDIWIEGEITNLRAPSSGHLYFTLKDEQSQL
RGVLFRSGALRLRFALQEGLTIVARGRISVYEPRGEYQLIVDSLEPKGVGAFQLAFEQLK
ERLAREGLFDDARKRPLPPFPRTVGVVTSRTGAAVRDIVAVLRRRCPVANILIAPVPVQG
EGAAERIADAITTLSGMPQVEVMIVGRGGGASEDLWAFNEEVVVRAIVQSKVPVVSAVGH
EIDVTLADFAADYRAPTPSAAAEAVVPVLDEIVERLGETSNRLDRIVRTLLEMQRHRFER
SVGVMREMRFRVQAHAQRLDELRDGLTRTLTERLTLLHRGMVERQHALLAQGPHRRIQTA
LVVIPQLYKRLEQETRRGLMSRRQAVASYMMALDALSPLAILSRGYSVIQAIPSGRIVRL
ASEVAVGDVVQARLAEGRLLCRVNEVLPPSMP
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaccggccacacccttccgctccctctgcttctttccgtatccgacgtgacgcgactt
atccgcgattccctggaagcgcagttccgggatatctggatcgagggtgaaattaccaac
ctccgcgctccgtcttccgggcacctgtattttaccttgaaagatgagcagagccagctt
cgcggagtgctctttcggtcaggggccttgcggcttcggtttgcgctgcaggagggcctg
acgatcgtcgcgcgcgggcgcatttcggtgtacgagccgcggggcgagtaccaactgatc
gtcgattcgctagagccgaagggcgtcggggcgtttcaactggcgttcgagcaactcaag
gagcggttggcgcgagaaggattgttcgatgacgcgagaaaacgtcccttgcctcccttt
ccgcgcacggtcggggtggtgacctctcgcacgggggccgcggtccgcgatattgtggcg
gtcctccgtcgccgctgtccggtcgcgaatattcttatcgcgcccgtgccggtccagggc
gagggagctgccgagcgaattgcggacgcgatcacgacgttaagcggtatgcctcaggtt
gaggtaatgatcgtcgggcgtggagggggcgcctcagaggacttgtgggcgttcaacgaa
gaagtggtcgttcgcgccattgtgcagtcgaaggttccggtcgtgtctgcggtagggcat
gaaatcgatgtgacccttgccgactttgccgcagactatcgggctccgactccttcagct
gcggccgaggcggtggtgccggtgttggacgagatcgtggagcgattaggtgagacctcg
aatcgtttggatcgaatcgtgcgcactttgctggagatgcagcgtcatcgattcgagcga
tcggtcggcgtgatgcgcgagatgcgctttcgagtgcaggcgcatgcccagcgtctcgat
gaattgcgcgacggattgacgcgcacgctgaccgaacggttgactctgctccaccgcggg
atggttgaacgccaacatgcgttgctggctcaaggaccgcaccgccggattcagaccgcg
ttggtggtgatcccgcaactgtacaaacggttggagcaggaaaccaggcggggactcatg
tccaggcggcaagcggttgcgtcgtacatgatggcattggacgctctcagtccattggcg
atcttaagccgcgggtatagcgtcatccaggccattccgtccgggcggatcgtccggctg
gcgtcagaggtggcggtgggggatgtggtgcaggcacggctggccgaggggcgtctgttg
tgtcgcgtcaatgaagtgttgccgccttcgatgccttga
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