Nitrospira defluvii: NIDE3727
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Entry
NIDE3727 CDS
T01281
Name
(GenBank) putative Soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nde01011
]
NIDE3727
Enzymes [BR:
nde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NIDE3727
Peptidoglycan biosynthesis and degradation proteins [BR:
nde01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NIDE3727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_6
TPR_19
TPR_2
TPR_16
TPR_14
ANAPC3
TPR_12
TPR_8
TPR_1
TPR_7
Fis1_TPR_C
DUF6584
Motif
Other DBs
NCBI-ProteinID:
CBK43405
UniProt:
D8P7Q9
LinkDB
All DBs
Position
complement(3708021..3710258)
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AA seq
745 aa
AA seq
DB search
MTALPWRISLSALAVWSVLSSLFLTATAESPRPLPVAAAPCVSAEDCFRSAVALNERSGS
PAQRDQTMMLKIDQLRSVMDLYPSTIWAKRAGVVLGVLLIEREPVEAAKRLRVVQPDMPV
LDDYLRLWIGESLLKQNEPIQAAELLETIPKIVPDSSLIAKAAYRTGEAWYSANVCFRAV
DWLGRAVVLAEKDPAAPLALWHQAECHIRENRLPEARTALKQLWLRYPHSPEAREAKARL
DTALGGESWAPTAEDHSIRAQAFLGLAMQAEAVEELRRFLAMAPGHPRRFDARLKLGVAY
VRLKQYDQARETFRALVADRVQESSEATVWLARVYLRQSQGDKLIGLARSVAQGALGGDQ
RATVHLFAGVWLEDQGQFDEAIGMFRQVAKLGDSASQRAEGLWRAGWAQYRTARYRDAAE
TFRSVVELHVNGFEPQAMYWAARADEHEKNTTVVDQYTRLCQRHAYSYYCQLAARRGSLP
PVTPVATDAERPTGDEASRLPENRRSEIERHVVYQRGIELKILGFAQDAARELGSLTEQY
SRDPEVLLAFSTLLSEVGAYHPALRVAKVHFKEKLERSGLPTAPALWTVAYPTGLLPTIT
AQGVTAVDPYLAAAIIREESQYDEKALSMVGAVGLMQLMPVTANAVAQRYGFPAVGREEL
FDQETNIRLGVRYLGQLLEQYGGNLAHAVAAYNAGPIAVNNWIAVHRGREQDEFVELIPY
QETRLYVKRVLRSYGEYRRLHNGTS
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcacttccctggcggatcagcttgtcggctcttgccgtgtggtctgtgctgtcg
agcctgttcttgacggccacagccgagtcaccgcgccccctgcccgttgccgctgcaccc
tgcgtctctgcggaagattgtttccgttccgctgtggcgctcaatgaacgttcgggctcg
cccgctcaacgcgatcaaacgatgatgctgaagatcgaccaactgcggtcggtgatggat
ctctatccttccacgatctgggctaagcgggccggggtggtgttaggcgtgttgttgatc
gagcgggagccggtcgaggcggcgaaacgtctgcgtgttgtccagccggacatgccggtg
ctcgacgactatctccgcctctggatcggggaatcgttgctgaagcagaatgaaccgatc
caagcggccgaattgctggagacgattcccaagatcgtgccggactcgagcttgattgcc
aaggctgcctacagaacaggcgaagcctggtatagcgccaatgtgtgcttccgggcggtg
gactggctggggcgggctgtggtgcttgcggagaaggatccggcggctccgttggccttg
tggcaccaggctgagtgccacatccgggagaatcgactgccggaggcgcgaaccgcgttg
aaacaactctggcttcggtatccccactcgcctgaagcacgagaggcgaaagcccgactg
gatacggcattgggcggagaatcctgggcgccgacggccgaagatcattcgattcgcgca
caggccttcctgggactggccatgcaagcggaggcggtcgaagaactgcgccgctttctg
gcgatggctcccgggcacccccgccggtttgatgcccgcctgaagttgggagtggcctat
gtccggctcaagcaatacgaccaggcccgtgagacgtttcgcgcgctagtagcggatcgg
gtgcaggaatcatccgaggccacggtatggttggctcgggtctatctgcggcagagtcag
ggcgacaaactcattggattggcgcgatcggtcgcgcagggggccctggggggcgaccag
cgggcgacggtgcatctcttcgccggggtctggctggaggatcaggggcagttcgatgag
gcgatcgggatgttccggcaggtggcgaagttgggagactcggcgagccagcgtgcggaa
ggtctgtggcgtgccgggtgggcgcaataccggacggcccgctatcgggatgccgctgag
acctttcgttccgttgtggagttgcatgtcaatgggtttgagcctcaggccatgtattgg
gcggctcgggcggacgaacatgagaaaaataccaccgttgtcgatcaatacacgcgcctc
tgtcagcggcacgcatacagttactactgccaactggctgcccggcgaggttcgttgccg
cccgttacgccggttgcgaccgacgcggagcgcccgacaggcgacgaggcgtcacggttg
ccggagaatcggcgttctgaaattgaacggcacgtggtgtatcaacgcggcattgagctc
aagatattggggttcgcccaggatgcggctcgcgaactgggctcgcttacagagcagtat
agtcgtgacccggaggtgttgctggccttctcaaccttgctcagcgaggtgggcgcatac
catccagcgttacgcgtggctaaggttcattttaaggagaaactggaacgaagcgggctg
cccacggcgcctgccctatggactgtggcctatccgaccggcctccttccgacgatcacc
gcgcagggcgtcaccgcggtggacccctatctggccgccgcgatcattcgcgaagagagc
cagtacgatgaaaaggccctctcgatggtgggagccgtggggttgatgcagttgatgccg
gtcacggcgaatgccgtagcgcagcggtacgggtttccggcggtgggacgggaagaactc
ttcgatcaggaaacgaacattcgattgggtgtgcggtatctggggcagttgctcgagcaa
tacggcgggaatctggcccatgcggtcgcagcttacaacgccggcccgattgccgtgaac
aattggattgcggtacatcgcggacgggagcaggatgagttcgtggaactcattccctat
caggaaacgcggctgtacgtgaagcgggtcttgcgcagctacggagaatatcgccgtctc
cacaacggcacgtcgtag
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