Nitrospira defluvii: NIDE3743
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Entry
NIDE3743 CDS
T01281
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
nde
Nitrospira defluvii
Pathway
nde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIDE3743 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE3743 (msbA)
Enzymes [BR:
nde01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NIDE3743 (msbA)
Transporters [BR:
nde02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIDE3743 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_23
AAA_16
AAA_30
DEAD
ABC_ATPase
AAA_29
AAA_15
DO-GTPase2
Zeta_toxin
NB-ARC
AAA_21
AAA_18
T2SSE
AAA_28
DUF87
AAA_14
nSTAND3
SbcC_Walker_B
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
CBK43421
UniProt:
D8P7S5
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All DBs
Position
3723064..3724794
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AA seq
576 aa
AA seq
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MFSFNRFYPFLKPYVPRMIAAAIMVMAVAAINLALLRLGGTLWDVITVQHDAARMTEMIL
LLLGLVLIQGLCSMGHSYLTAWVSQRVMADFRIHLFAHLETLSVNFFSKRRTGELMSRLM
NDVTVIQNVVTDTPIDAAKQIVTFIGGAGFLFAMNWQLCLLILVLLPMLVVVAKLFGRRL
RALSTKIQDQTAAVSTLVEEVIAGIRVVKSFVQTKREEERFVAQVQSAMELSLRRATIMA
WFVPTIIFVTFAAAALVLWYGGRQVIDGSVSPGDLFAFVLFAGILIGPFGSAARVFAQIK
EAQGAMQRVFEILDTHAEIADAPGAVDLPPIRGHVRAEHISFAYDPRQPILSDLSFEAKP
GELIAIVGPTGSGKTTIMNLLHRFYDPTAGRLTVDGHDVKDVRLDSLYRQIALVPQDTIL
FGGPIRDNIRYGREDASEEEMIAASKAAHAHEFIVGFPDGYQTIVGEKGINLSGGQRQRV
AIARAILKNPRILLLDEATSALDTESERLVQEALERLMVNRTTFVVAHRLSTIQRADRIL
VLNKGKIVEEGTHAALLEQRGLYHYLYTLRLSELPV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgtttaaccgattctaccccttcctcaagccctacgttccccggatgatcgcc
gccgccatcatggtcatggcggttgcagccatcaaccttgccctccttcgcttaggcggc
accctgtgggacgtcatcaccgtccagcacgatgccgcgcgcatgacagaaatgatcctg
ctcttgttgggcttggtcttgatccaggggctatgttcgatgggacacagttacctcacc
gcctgggtctcccaacgggtgatggccgatttccggatccatctcttcgcacatctcgag
acgctgtcggtcaacttcttctcgaagcgccgaaccggcgaattgatgtcccgcctcatg
aacgatgtcaccgtcattcagaacgtcgtgaccgatacaccgatcgatgcggcgaaacaa
atcgtcacgttcatcggtggcgcgggcttcctgttcgccatgaactggcaactctgcctg
ctcattctggtgctgctcccgatgctggtcgtcgtggccaaactgttcgggcggcgactc
cgggcgctgtctaccaaaatccaggaccaaaccgccgccgtcagcacgctggtcgaagaa
gtcattgcagggatccgcgtcgtgaaatccttcgtccaaacgaaacgggaagaagaacgg
ttcgtggctcaggtccagtccgcgatggagctgtcactgcgccgtgccaccatcatggcc
tggttcgtgccaaccatcatcttcgtcacctttgccgccgccgccctcgtcttgtggtac
ggcggccgccaggtcatcgacggctcagtctccccaggcgacctgtttgcctttgtgcta
ttcgccggcattctgatcggaccgttcggatcggcagcccgggtgttcgcgcagatcaag
gaagcccaaggggccatgcagcgcgtctttgagattctcgacacccatgccgaaattgcc
gatgccccgggcgccgtcgacctgccgcccattcgtggtcacgtgcgcgcggagcacatc
agctttgcctacgatccccggcagccgatcctctcggacctctccttcgaggccaagccc
ggcgagttgattgcgatcgtcggtcccaccgggtcaggcaagacgacgatcatgaacctc
ctgcaccgattctacgacccgaccgccggacggctcacggtggacggccacgatgtcaaa
gacgttcgcctcgacagcctgtaccgccagatcgccctggtgccgcaagacacgattctg
tttggcgggcccatccgggacaatattcggtacgggcgtgaagacgccagcgaagaagaa
atgatcgctgccagcaaggccgcgcatgcccacgagttcatcgtgggatttccggacggc
tatcaaaccatcgtcggagaaaagggcatcaatctctcaggcggtcaacgccaacgtgtc
gctattgcgcgagccattctgaagaatcccagaattctcctgctcgacgaggccacctcc
gccctggatacggaatccgaacggctggtgcaggaggcgttggagcgcctgatggtcaac
cgcaccactttcgtcgtggcacaccggctcagcaccattcaacgcgccgatcgcattctg
gttctgaataaagggaagatcgtggaagaagggacccatgccgcgctgctggagcagcgg
ggtctctatcattacctgtataccctgcgactcagcgaactgcccgtgtaa
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