Nitrospira defluvii: NIDE3952
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Entry
NIDE3952 CDS
T01281
Symbol
pdhB
Name
(GenBank) Dehydrogenase (E1) component of pyruvate dehydrogenase complex, beta subunit (Transketolase)
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
nde
Nitrospira defluvii
Pathway
nde00010
Glycolysis / Gluconeogenesis
nde00020
Citrate cycle (TCA cycle)
nde00620
Pyruvate metabolism
nde00785
Lipoic acid metabolism
nde01100
Metabolic pathways
nde01110
Biosynthesis of secondary metabolites
nde01120
Microbial metabolism in diverse environments
nde01200
Carbon metabolism
nde01210
2-Oxocarboxylic acid metabolism
Module
nde_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NIDE3952 (pdhB)
00020 Citrate cycle (TCA cycle)
NIDE3952 (pdhB)
00620 Pyruvate metabolism
NIDE3952 (pdhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NIDE3952 (pdhB)
Enzymes [BR:
nde01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
NIDE3952 (pdhB)
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
CBK43622
UniProt:
D8P7Z0
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All DBs
Position
complement(3918486..3919463)
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AA seq
325 aa
AA seq
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MLLSYREALNQAMREEMRRDPRIFLIGEEVGYYQGAFKVTKGFVEEFGPQRVVDTPITEA
GFTGLAIGAAMAGLQPIVELMTMNFGIVALDQIVNNAAKIRYMSGGQLSVPIVIRGPGSA
AHQLGAQHSQSLEAWFCHVPGLKVVAPATPQDAKGLLKSAIRDQNPVIFIEAQLLYGTKG
EVTEGEYTIPLGQAEVKRAGADVTVVAYSKMLLVALEAADQLSREGLDVEVIDPRTLKPL
DLNTIVASVKKTGRLVIVEEGWRFCGLGAQIADSIYSAAFDYLDGPIVRVTGEEVPMPYS
RPLEDAAVPDAPRVIAAVKSVCGAA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgtcgtaccgggaagccctcaaccaggccatgcgggaagaaatgcgccgcgac
ccacgcatctttttgatcggcgaagaagtgggctactaccagggcgccttcaaggtcacc
aagggattcgtcgaggaattcggcccgcagcgggtggtcgatacgccgattaccgaagcg
ggattcaccggtttagccatcggcgcggcaatggcgggattgcagccgatcgtcgagctg
atgaccatgaatttcggtatcgtggcgctggatcagatcgtgaacaatgccgccaaaatc
cgctacatgtccggcggccagctttcggtgcccatcgtgattcgtggtcccggcagcgcg
gcgcaccaactgggcgcgcaacattcgcaaagcctggaagcctggttttgccacgtgccg
ggtttgaaggtcgtcgcgccggccacgccacaggatgcgaaggggttgctgaagagcgcg
atccgcgaccagaatcccgtgatctttatcgaagcgcaactgttgtacgggacgaagggc
gaagtgactgaaggggagtacacgattcccttaggtcaggccgaggtgaagcgggcgggg
gcggatgtgaccgtcgtggcctattccaagatgttgttggtggcactggaggcggcggat
cagctgagtcgcgaagggctcgacgtcgaagtgatcgacccgcgcacgctcaagccgttg
gatctcaacacgatcgtggcctcggtcaagaagaccgggcgcctggtgatcgtcgaagaa
ggctggcgcttttgcggcctgggggcccagattgcggacagcatttactcggcggcgttc
gactatttggacggtcccatcgttcgcgtgaccggcgaagaggtgcccatgccctacagc
cgtccgctggaagacgcggccgttccggatgcgccgcgtgtgatcgccgccgtcaagtcg
gtctgtggtgccgcatga
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