Nitrospira defluvii: NIDE4028
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Entry
NIDE4028 CDS
T01281
Symbol
hscA
Name
(GenBank) Chaperone protein HscA (Hsc66)
KO
K04043
molecular chaperone DnaK
Organism
nde
Nitrospira defluvii
Pathway
nde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIDE4028 (hscA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nde03019
]
NIDE4028 (hscA)
03110 Chaperones and folding catalysts [BR:
nde03110
]
NIDE4028 (hscA)
03029 Mitochondrial biogenesis [BR:
nde03029
]
NIDE4028 (hscA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nde04147
]
NIDE4028 (hscA)
Messenger RNA biogenesis [BR:
nde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NIDE4028 (hscA)
Chaperones and folding catalysts [BR:
nde03110
]
Heat shock proteins
HSP70 / DNAK
NIDE4028 (hscA)
Mitochondrial biogenesis [BR:
nde03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
NIDE4028 (hscA)
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
NIDE4028 (hscA)
Exosome [BR:
nde04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NIDE4028 (hscA)
Exosomal proteins of breast cancer cells
NIDE4028 (hscA)
Exosomal proteins of colorectal cancer cells
NIDE4028 (hscA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Motif
Other DBs
NCBI-ProteinID:
CBK43697
UniProt:
D8P865
LinkDB
All DBs
Position
3985276..3987096
Genome browser
AA seq
606 aa
AA seq
DB search
MSRIVGIDLGTTNSLVAYMDHGTPRVISAQNERAMVPSVVSLTDNGLMVGDPAKEHLTRN
PERTVYSVKRFMGKSLADVQGELAYFPYTLTEKGGVIRIQLGEKSYSPPQISAMILKELK
LRAEAFLGESITKAVITVPAYFNDSQRQATKDAGMIAGLEVLRIINEPTAASLAYGLQKK
TQGTIAVYDLGGGTFDISILKLKNGIFEVLATNGDTHLGGDDFDQQIADLFLAEIRTQYG
LDLSTHPDNMQAVRLEAERTKIRLSDELKTTASLDLPDGKGRFTRELTRDQLDALSIALV
ERTLGPCRLALKDSGLAPGDIDEVVLVGGSTRMPLVRQRVQALFGKQPHCELNPDEVVAL
GAAVQADILSGGTTDMLLLDVTPLSLGIETMGGVMSSLIRRNTTIPASAKEMFTTYVDGQ
TGVDIHILQGERELAKDNRSLARFRLKVPPLPAGVPRIEVTFLIDANGILNVMAKDMRTG
ETQSMEVKPSYGLSDQEVERMIEDSFKFAADDVNARKLIEARLDAGALITTTEKSLADGG
HLVATGEIEAIRAALSALVTAKDGNDPRAIRARMADIEQAAKGLTVAMLDDSLKQGLQGK
KVSDVT
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtattgtcggtatcgacctcggcactaccaattctctcgtcgcatacatggat
catggcaccccgcgtgtcatctcggcgcagaatgaacgcgcgatggtcccttcggtcgtc
tcgctgacggataacggactgatggtcggtgatccggcaaaagaacatctcacgagaaat
cctgagcgtacggtctattcggtcaagcggttcatgggcaagagcctggccgacgtccag
ggcgaactggcctactttccctacacactcacagaaaaaggcggcgtcatccggatccag
ctgggggagaaatcctactcccccccgcagatctcggccatgatcctcaaagaactcaag
cttcgggctgaagcctttctgggggaaagcatcaccaaggccgtcatcaccgtacccgcc
tacttcaacgatagccagcgtcaggccacgaaggacgcgggcatgattgccgggctcgag
gtgttgcgcatcattaatgagcccaccgccgcttccttggcctatggattacagaaaaag
acacagggcaccatcgccgtctacgatctaggcggaggcacattcgacatctcgatcctc
aagttgaaaaacgggatcttcgaagtgctcgccacaaacggcgatacccatctaggcgga
gacgatttcgaccagcagattgccgatctgttcctcgctgagatccgcacacagtacggg
ctcgacctcagtacgcatcccgacaatatgcaggctgtccgtctcgaagccgagcgcacg
aagatacgtctttcggacgaactcaagacgaccgccagtctcgatctgccggacgggaaa
ggccgatttacccgtgagctcacgcgcgatcaacttgatgcgctcagcatcgccttagtt
gagcgcacgctgggtccctgccgtctggccttgaaagattccggactagcgcccggcgac
atcgatgaagtcgtccttgtcggcggctcgacacgcatgccactggttcgccaacgagtg
caagccctgttcgggaagcaaccgcactgcgagctgaatccggacgaagtggttgcgctc
ggcgcggcggtacaagcggatattctgagcggcggcacaacggacatgttgctgctggat
gtgacccccctgtcattgggtatcgagacaatgggcggggtcatgagcagcctgatcaga
cgaaacaccaccatccccgccagcgccaaggaaatgtttaccacatatgtggacggccaa
acgggggtggacattcatattctccagggcgaacgggagctggcaaaagataatcgcagc
ctggcccgtttccgtctcaaggtgccgccattgcccgcgggagttccacgcattgaagtg
accttcctgatcgatgcgaacggcattctgaacgtcatggccaaagacatgcggaccggc
gagactcaatcgatggaagttaaaccctcctacgggttatcggatcaagaagtagagcgg
atgatcgaagattcgttcaagttcgccgcagacgacgtcaacgcgcgaaagctgatcgaa
gcccgactcgatgcaggagcgctgatcaccacgaccgaaaaatcgttagcggacggtggg
catctcgtcgccacaggagagatcgaggccattcgcgcggccctctcggcgctggtcacg
gccaaagacggaaacgatccccgtgccatccgtgcgcgcatggctgacattgagcaggca
gccaagggcctcaccgtggccatgctggacgactccctcaagcaagggctccaaggcaaa
aaagtctctgatgtgacgtaa
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