Nitrospira defluvii: NIDE4122
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Entry
NIDE4122 CDS
T01281
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
nde
Nitrospira defluvii
Pathway
nde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NIDE4122 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nde03400
]
NIDE4122 (mutS)
DNA repair and recombination proteins [BR:
nde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NIDE4122 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
Nuc_rec_co-act
Motif
Other DBs
NCBI-ProteinID:
CBK43790
UniProt:
D8P8F8
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Position
4073060..4075708
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AA seq
882 aa
AA seq
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MGDADGTPLMRQYRDIKQAYRDAILFFRVGDFYEMFQEDAVEASKLLSIALTSRDKSSGT
PIPLCGVPYHAATNYIAKLLRAGRTVALCEQVEDPKLAKGLVRREVVRLYTPGTLIDSEF
LPSTESNVLAAVSVRLRSAGTGRKDCSYGLATLEVSTGDYWLSEFHGPQAEAALRDELAR
LEPRELLFPENLSPDELQWTADLTGPRCCTQPATWFDQEQGRIALQEQFHVHSLEAFGCH
ILTLGIQAGAAVLRYVRETQPSAPLDHIRPPRVRQDDDAMHLDSVTIRNLELVKPAGRAE
ESSNQSPYTLLGILDRTVTAMGSRLLREWLLRPLVNSAAIEVRLTAVDELKRQIDIRVRL
RTALRIVQDISRLCSRMSLGVANPRDVLALKISVSSLPAIQAELSALDSPLIADLRSSWD
NAQDLYELIEGAIEQEAPVSIRDGSILKSGFHPEVDELRKASREGKGWIAGLEAKERERT
GVESLKIRYNQVFGYYIELTKANLGKVPPDYIRKQTLVNAERFMTTELKELEERVTGADT
KLTALEQALFEQLRTRLATETARLQEISRRLAILDVVAALAETAALNRYVRPTVDEGDGL
HILQGRHPVVERLDLSGGFIPNDTHLDLATSRLHILTGPNMAGKSTYLRQVALITLMAQM
GSFVPATEARIGLTDRIFTRVGASDNLAGGQSTFMVEMTESAHILNCATPRSLILLDEIG
RGTSTYDGLSIAWAIAEYIQDPQRLGARTLFATHYHEMTQLESLREGITNYCVAVQERDG
RVLFLRKIIRGGADRSYGIHVAQLAGLPDQVIHRAKAVLAQLESSSSSGRPVQDNQQSLH
FDATLPPPHPMLEEVRQMDLFSMTPLDALNRLAELQQRLLKE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgccgacggcaccccattgatgcggcaatatcgcgacatcaaacaggcctat
cgcgatgccatcctctttttccgtgtgggcgatttctatgaaatgttccaggaagacgca
gtggaggcgtccaaacttctctccattgcgctgacctcacgcgataaatccagcgggacc
ccgatccctctctgcggtgtcccctatcacgccgccaccaattacatcgcgaaactcctc
cgtgcgggacgaaccgtcgccctgtgcgagcaggtcgaagaccccaaactggccaaaggt
ctggtacgcagggaggtcgtccgcctctatacccccggcactctcatcgatagcgaattc
cttccctccacggaatccaacgtgctggccgcggtatctgtgcgccttcgctccgcaggg
accggacgcaaagactgttcctacggccttgccacgcttgaagtctcaaccggagactat
tggctcagtgagtttcatgggccacaagcagaggccgcgttgcgggacgaactggcgcgc
cttgaaccgagagaattgctgtttccagagaatctctccccggacgaattacagtggact
gccgatctgaccggtccccgatgctgcacgcaacctgcgacctggttcgaccaggagcaa
ggtcgcatcgcgttacaggaacagtttcatgtacattccctggaagctttcggctgccac
atcctcacactgggcatccaggccggggcggcagtgttgcgctacgttagagagacccaa
ccgtcggctccgctcgaccatatccgtccgccacgggtgagacaggatgatgacgccatg
cacctggacagcgtcaccatccgtaacctggaactcgtcaagcctgccggtcgtgcagag
gaatcgtcgaaccagtccccctatacattattgggcattctggatcgcaccgtcaccgcc
atgggaagccggttgctccgtgagtggctcctgcggccattggtcaacagtgcggcaatc
gaggtccgactgacagcagttgacgaactcaaacgacagatcgacatacgagttcgcctc
cgaacggcattgcgaatcgtccaggacatttcccgtctctgtagccgcatgtccctcgga
gttgccaatccgcgagatgtcctcgcactgaagatttccgtctcttcgctccccgccatt
caggccgaattgtccgcactcgattctccactcatcgccgacttgaggtcgtcatgggac
aacgctcaggatctctacgagttgatcgaaggagccatagagcaggaagcgcccgtatcg
attcgcgacggcagtatcctgaagagcggcttccaccccgaagtcgatgagcttcgcaag
gcaagccgggagggcaaaggctggattgccggcctggaagccaaagaacgcgaacggacc
ggcgttgagtcgcttaaaatcagatataaccaagtctttgggtactatatcgaactcaca
aaggccaatctcgggaaggtaccgccggactatatccgcaagcaaaccctggtcaatgcc
gagcgcttcatgaccaccgagctgaaagaacttgaagagcgggtcacgggagccgacaca
aaactgaccgccctggagcaagcgctgttcgaacaactccggacacgactcgctacggaa
acagcccgccttcaggagatcagccgccgattggccatccttgatgtagtcgccgccctc
gcggaaaccgccgcgctcaatcgctacgtgcgaccgaccgtcgacgaaggtgatggcctc
catatccttcagggccgacacccggtcgtcgaacgccttgatctctccggtggatttatc
ccgaacgatacccatctggatctggctaccagccggctgcacattctgaccggccccaac
atggctgggaagagcacctacctccgacaggtcgctctcattaccttgatggcccagatg
ggaagctttgttcccgccacggaagcgcgcatcggactgacggatcgcatttttaccaga
gtcggcgcatccgacaatctcgcaggaggccagagtaccttcatggttgagatgacggaa
tcggcccatatcctcaactgcgccacacctcgtagcttgatcctcctggatgaaatcggc
cgtgggacgagcacctacgacgggctcagcattgcctgggccatagcagaatacatccag
gatcctcagcgtctcggcgcgcgcacgctctttgctacgcactatcatgaaatgacgcaa
ttggagagtctacgggaagggattacgaactattgcgttgcggtacaggaacgtgacggg
agggtgctgtttctgcgaaagattattcgcggcggcgccgatcgcagctacggaatccac
gttgctcagctggcaggtctccccgaccaggtgatacaccgggccaaggccgttcttgct
caactggagtcctcgtcgtcatccggacggccagtgcaggacaaccaacagtcgcttcac
tttgatgccacgctccctccgccgcatcctatgcttgaggaagttcgccaaatggatctc
ttctccatgaccccccttgatgcgctcaatcggcttgcagagctacaacaacggctgctg
aaggaatag
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