Nitrospira defluvii: NIDE4397
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Entry
NIDE4397 CDS
T01281
Symbol
hisS
Name
(GenBank) Histidyl-tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
nde
Nitrospira defluvii
Pathway
nde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NIDE4397 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nde01007
]
NIDE4397 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nde03016
]
NIDE4397 (hisS)
Enzymes [BR:
nde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
NIDE4397 (hisS)
Amino acid related enzymes [BR:
nde01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NIDE4397 (hisS)
Transfer RNA biogenesis [BR:
nde03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NIDE4397 (hisS)
Prokaryotic type
NIDE4397 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
HGTP_anticodon2
Motif
Other DBs
NCBI-ProteinID:
CBK44056
UniProt:
D8P974
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All DBs
Position
4314524..4315780
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AA seq
418 aa
AA seq
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MIKAIKGVKDLLPEESPRWRFIEDTARQWALRYGFQEIRVPIFETTTLFARSIGASTDIV
EKEMYTFADRDGSSLTLRPEGTAGTVRAFIEHNRAADPRPQKYCYAGPMFRHERPQAGRL
RQFHQFGVESFGVSDPRADVEVISLLWRLLSDLTLPGLTLEINNLGYTEDRARYKPLLVA
FLNGVQSRLCGNCQRRIETNPLRVLDCKVPECRSATEDAPRLADSLSSEARDHFERVTSG
LQSVGIPFHMNPRLVRGLDYYCLTAFEVTCSHLGAQNAVGAGGRYDGLVEQLGGAAVPAV
GFAVGLERIALMLPETVAVPSIPRVYVAAFGTQAVGLGFTLLDELRRTGVPADMDFRAAS
LKAHLRQADRLNALYTILLGDDEVTKGVATVRNMQTKAQEDVPIPDLASALRTRLVNR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagcgattaagggcgtcaaagatcttctgcctgaagagtccccccgctggcga
ttcatcgaagataccgccaggcagtgggcactccgttacggttttcaagagatccgcgtc
ccgattttcgagaccacgacgttgttcgcgcgcagcatcggcgcctcgaccgatatcgtc
gaaaaggaaatgtacaccttcgccgatcgcgacggatcgtccctgaccctgcgcccggaa
gggacggccgggacagtccgggcattcatcgagcacaatcgcgccgccgatccgcggccg
caaaaatattgttacgccgggccgatgttccgccacgagcgtccccaggccgggcgtttg
cgtcaatttcatcagtttggtgtggaatccttcggtgtgtccgacccgcgggccgatgtc
gaagtcatctcgctgttgtggcgactcttgtccgacctcacgctgccgggattgaccctg
gaaatcaacaatcttggatatacggaggaccgggcccggtacaaaccgctcctggtggcg
tttctgaacggtgtgcaaagccgcctctgcggaaattgccagcgccggatcgagacgaac
ccgttacgcgttctggactgcaaagttccggaatgccgctcggcgactgaggatgctccc
cgcctggctgattccttgtcatccgaagcgcgggaccatttcgagcgcgtgacgtccggc
cttcaatcggtaggcatcccgttccacatgaacccccggctcgtccgtggcttggactat
tactgtctcaccgcattcgaagtcacctgctcccacttgggtgcgcagaatgccgtcggt
gccggtggccgctatgacggtcttgtcgaacaactcggtggagccgcggtgccggcagtc
ggattcgccgtcgggctggaacggattgccctgatgttgccggagacggtagccgtgccg
tccattcctcgggtttacgtcgctgccttcggcacccaggccgtcggtctcggatttacg
ctgctcgatgaactccgtcgaaccggagtgccggccgatatggatttccgagcggcgtca
ctcaaggcccacttgcgtcaggccgatcgtcttaatgctctctatacgatccttctcggt
gacgatgaagtgacgaaaggtgtcgccaccgtccggaatatgcagacaaaagcacaggaa
gatgtcccgattccagacctcgcatcagccctccgcaccaggctcgtcaacaggtaa
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