Niabella defluvii: KRR40_01240
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Entry
KRR40_01240 CDS
T10250
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ndf Niabella defluvii
Pathway
ndf00300
Lysine biosynthesis
ndf00470
D-Amino acid metabolism
ndf01100
Metabolic pathways
ndf01110
Biosynthesis of secondary metabolites
ndf01120
Microbial metabolism in diverse environments
ndf01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ndf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KRR40_01240 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KRR40_01240 (lysA)
Enzymes [BR:
ndf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KRR40_01240 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ULT42296
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Position
complement(161203..162405)
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AA seq
400 aa
AA seq
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MGNELSLTQLNDIAGQYGTPLYVYNGDKIAAQYKRLTAAFKSDKVRFFYACKSLTNINIL
KLLKAEGCNVDCSSINEVKLALYAGFEPQHILYTSNGIAFSEIEEAQSLGVIINIDSLSN
LEKFGKKFGSSYPVGVRLRPNIMAGGNLKISTGHDKSKFGIPVDQLGELVNVVAQHQIQI
TNLHIHTGSDIKDPDVFVKGIEVLFDIIPHFPHLKSIDLGGGFKVAYKEDDPFINIEELA
EKVLHTFDSNDLTKDLQIWFEPGKFLVSESGYFITQVNVLKETSATTFAGVNSGFNHLIR
PMFYDAYHRIQNISNPGGAIKEYTVTGNICETDTFAWSRPLPEIREGDLLVFYNAGAYGF
EMSSNYNSRFKPAEVLVEKGKPRLIRRRDVFEDLLKNQVL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgaactgagccttacgcaacttaatgatattgcaggccaatatggtacaccg
ctgtatgtgtacaacggagataaaatagccgcacaatataaaaggctgacagcggcattt
aagagcgataaagtgcgttttttctatgcttgtaaatcgcttaccaatatcaatatttta
aagctgttgaaggcagaagggtgtaatgtagattgcagttctattaacgaagtgaaattg
gctttgtatgcaggttttgagccgcagcatattttatacaccagcaatggcattgccttt
agtgaaattgaggaagcgcagtcattaggtgtaattatcaatatcgatagcctttctaac
ctggagaaattcgggaaaaaatttggaagcagttacccggtaggtgtacgtttaaggcct
aatattatggctggcggaaaccttaagatatctacggggcatgataaaagtaaattcggc
attcccgtagatcaactgggtgagctggtaaacgtggtggcgcagcaccagattcagatc
actaatcttcatattcataccgggagcgatattaaagaccctgatgtatttgtgaaagga
atagaagtattgttcgacattattcctcattttccgcatttgaaatcgattgatttgggt
ggtggctttaaggtagcttataaggaagatgatccgtttatcaacatagaggaacttgcg
gaaaaggtattacatacttttgattcgaacgatcttacgaaagatctgcagatatggttt
gaacctggtaaattcctggtaagtgaaagcggctatttcattacgcaggttaatgtattg
aaagaaacttcagccaccacgtttgcgggggtaaacagcggttttaatcatttaattcgt
cctatgttctacgatgcgtatcaccgtatccaaaatataagcaacccgggaggggcgatt
aaggaatatactgtcacaggtaatatatgcgaaaccgatacattcgcctggtcgcggcct
ttgcctgaaatacgggagggagacctgctggtattttataatgcaggtgcatacggtttt
gaaatgtcgagcaattataactcgcgttttaagccggcagaagtgctggtagagaagggg
aaaccccgtttgatccgtagaagggatgtatttgaagacctgttgaaaaaccaggtactt
taa
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