KEGG   Niabella defluvii: KRR40_10730
Entry
KRR40_10730       CDS       T10250                                 
Name
(GenBank) signal recognition particle protein Srp54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ndf  Niabella defluvii
Pathway
ndf02024  Quorum sensing
ndf03060  Protein export
ndf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ndf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    KRR40_10730
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    KRR40_10730
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KRR40_10730
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ndf02044]
    KRR40_10730
Enzymes [BR:ndf01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     KRR40_10730
Secretion system [BR:ndf02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   KRR40_10730
  Eukaryotic Sec-SRP protein
   KRR40_10730
SSDB
Motif
Pfam: SRP54 SRP54_N Zeta_toxin AAA_22 SRPRB CbiA cobW CLP1_P AAA_17 AAA_18 ATPase AAA_33 AAA_30 nSTAND3 AAA_24 APS_kinase AAA_19 AAA_16 SLFN-g3_helicase SPOUT_MTase MMR_HSR1 6PF2K NACHT ATP_bind_1 ResIII DO-GTPase1 KAP_NTPase KTI12 AAA ATPase_2 AAA_28 AAA_29 TsaE AAA_23
Other DBs
NCBI-ProteinID: ULT43821
LinkDB
Position
1369935..1370843
AA seq 302 aa
MFNNLQDKLESAFKNLKGQGRITELNVASTIKEIRRALVDADVNYKIAKDFTDKIKDQAV
GEKVINAVSPGQLMVKIVKDELTELMGGEEAPFNAKGNPAVILIAGLQGSGKTTFSGKLA
NFLKTKKGLNPLLVAADIYRPAAMEQLRVLGEQIGVEVHIEQENKDAVSIAQTAVASAKS
KNKNVVIIDTAGRLAIDEQMMTEVANIKNAVNPQEILFVVDSMTGQDAVNTAKAFNERLD
FSGVVLTKLDGDTRGGAAISIKYTVNKPIKFVSNGEKMDALDVFYPERMAQRILEWVISP
RW
NT seq 909 nt   +upstreamnt  +downstreamnt
atgttcaacaatctacaggataaattagaaagcgcctttaaaaacctgaaaggccagggc
aggataaccgaacttaacgttgcatctaccataaaagaaatccgccgtgcactggtagat
gcggacgtcaactataaaatagcgaaagattttactgataaaatcaaggatcaggctgtt
ggagaaaaagtgatcaacgccgttagcccgggccagttgatggtgaaaatcgtaaaagat
gaactgacagagctgatgggtggcgaagaggctccgtttaacgcaaaaggcaaccctgcg
gtgatattgattgccggcttgcagggtagcggtaaaaccacctttagcggaaagctggct
aacttcctgaaaaccaagaaaggcttaaatcctttgctggtagctgccgatatttacagg
cctgcagcgatggaacagctgcgtgtattgggagagcagattggcgtggaagtgcatatc
gaacaggaaaataaagatgcagtgagcattgcgcaaactgcagtggcaagcgccaaaagc
aaaaataaaaatgtggttattatagatactgcgggtcgcttagctatagatgagcaaatg
atgaccgaggtagctaatattaaaaatgctgtaaacccgcaggaaatactttttgtggtg
gatagcatgaccgggcaggatgcggtaaacacggccaaggcgtttaacgagaggctggat
tttagcggcgtggtgctgaccaaactagacggcgacacccggggtggtgcggccatatcg
atcaagtacacggtaaacaaacctattaagtttgtcagcaacggcgaaaaaatggatgcg
ctggatgttttttaccccgagaggatggcgcagcgtatattagaatgggtgatatcacct
cgctggtag

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