Niabella defluvii: KRR40_12015
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Entry
KRR40_12015 CDS
T10250
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ndf Niabella defluvii
Pathway
ndf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KRR40_12015 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndf03400
]
KRR40_12015 (ruvB)
Enzymes [BR:
ndf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KRR40_12015 (ruvB)
DNA repair and recombination proteins [BR:
ndf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KRR40_12015 (ruvB)
RecFOR pathway proteins
KRR40_12015 (ruvB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_18
AAA_14
Rad17
AAA_3
AAA_33
RNA_helicase
AAA_17
NB-ARC
NPHP3_N
TsaE
NTPase_1
AAA_28
nSTAND3
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ULT44033
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All DBs
Position
complement(1523861..1524721)
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AA seq
286 aa
AA seq
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MLFHGPPGLGKTTLSRIVANELGVNIKETSGPVIEKPGDLAGLLTSLEPNDVLFIDEIHR
LSTVVEEYLYAAMEDYRLDILIDSGPNARSIQLSLNPFTLIGATTRSGLLTAPLLSRFAI
KSRLEYYSAETLTKIVLRAAKILGTTISDDAAKEIAKRSRATPRIANGLLRRVRDFAQVL
NDGEIDLGITQHALKALNVDEYGLDEMDNRILLAIIDKFKGGPVGITTIATAVGEEAGTL
EEVYEPFLIQEGFMQRTPRGREATHKAYEHLGKKPNRGGSSLELNF
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgttgtttcatggccctcccggcctgggtaaaactaccctgtcgcgcattgtggccaat
gagctgggagtgaatatcaaagaaaccagcggccctgtaattgaaaagcccggcgatctc
gcgggtttattaacctccctcgagcctaacgatgtgttgtttatcgatgagatacatcgc
ctgagtaccgtggtggaagagtacctgtatgctgcaatggaagactaccggctggatata
ttaattgatagtggtcccaatgcccgcagcatacagctgtcgctcaacccctttacatta
attggcgctactacccgcagtggtttgcttactgcgccgctgctttcaagatttgccatc
aaatcaagactggagtactattctgccgaaacgctcaccaaaatcgtattacgcgccgca
aaaattttaggtactaccatctctgacgatgccgctaaagaaatagccaaacgtagccgc
gccacaccccgtatcgccaatggcttgttacgccgggtgcgtgattttgcacaggtgttg
aatgatggcgaaatagatcttggtataacacagcatgcgctaaaagcattgaatgtagat
gagtacgggttggatgaaatggacaaccgcatattgctggccattattgataagtttaag
ggcggcccggtaggtatcaccaccatcgctactgcagtaggagaagaagcgggcacactt
gaagaggtatacgaacctttcctgatacaggagggttttatgcaacgtacgccccgcggc
cgtgaggcaacccataaggcttatgagcatttaggaaagaaacctaacagaggcggaagc
agcttggaactgaatttttaa
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