KEGG   Niabella defluvii: KRR40_12015
Entry
KRR40_12015       CDS       T10250                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
ndf  Niabella defluvii
Pathway
ndf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ndf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    KRR40_12015 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ndf03400]
    KRR40_12015 (ruvB)
Enzymes [BR:ndf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KRR40_12015 (ruvB)
DNA repair and recombination proteins [BR:ndf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     KRR40_12015 (ruvB)
    RecFOR pathway proteins
     KRR40_12015 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 AAA_18 AAA_14 Rad17 AAA_3 AAA_33 RNA_helicase AAA_17 NB-ARC NPHP3_N TsaE NTPase_1 AAA_28 nSTAND3 AAA_24
Other DBs
NCBI-ProteinID: ULT44033
LinkDB
Position
complement(1523861..1524721)
AA seq 286 aa
MLFHGPPGLGKTTLSRIVANELGVNIKETSGPVIEKPGDLAGLLTSLEPNDVLFIDEIHR
LSTVVEEYLYAAMEDYRLDILIDSGPNARSIQLSLNPFTLIGATTRSGLLTAPLLSRFAI
KSRLEYYSAETLTKIVLRAAKILGTTISDDAAKEIAKRSRATPRIANGLLRRVRDFAQVL
NDGEIDLGITQHALKALNVDEYGLDEMDNRILLAIIDKFKGGPVGITTIATAVGEEAGTL
EEVYEPFLIQEGFMQRTPRGREATHKAYEHLGKKPNRGGSSLELNF
NT seq 861 nt   +upstreamnt  +downstreamnt
gtgttgtttcatggccctcccggcctgggtaaaactaccctgtcgcgcattgtggccaat
gagctgggagtgaatatcaaagaaaccagcggccctgtaattgaaaagcccggcgatctc
gcgggtttattaacctccctcgagcctaacgatgtgttgtttatcgatgagatacatcgc
ctgagtaccgtggtggaagagtacctgtatgctgcaatggaagactaccggctggatata
ttaattgatagtggtcccaatgcccgcagcatacagctgtcgctcaacccctttacatta
attggcgctactacccgcagtggtttgcttactgcgccgctgctttcaagatttgccatc
aaatcaagactggagtactattctgccgaaacgctcaccaaaatcgtattacgcgccgca
aaaattttaggtactaccatctctgacgatgccgctaaagaaatagccaaacgtagccgc
gccacaccccgtatcgccaatggcttgttacgccgggtgcgtgattttgcacaggtgttg
aatgatggcgaaatagatcttggtataacacagcatgcgctaaaagcattgaatgtagat
gagtacgggttggatgaaatggacaaccgcatattgctggccattattgataagtttaag
ggcggcccggtaggtatcaccaccatcgctactgcagtaggagaagaagcgggcacactt
gaagaggtatacgaacctttcctgatacaggagggttttatgcaacgtacgccccgcggc
cgtgaggcaacccataaggcttatgagcatttaggaaagaaacctaacagaggcggaagc
agcttggaactgaatttttaa

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