Niabella defluvii: KRR40_33540
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Entry
KRR40_33540 CDS
T10250
Name
(GenBank) oligogalacturonate lyase family protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
ndf Niabella defluvii
Pathway
ndf00040
Pentose and glucuronate interconversions
ndf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ndf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KRR40_33540
Enzymes [BR:
ndf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
KRR40_33540
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
YqgU
Motif
Other DBs
NCBI-ProteinID:
ULT39795
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Position
complement(4304597..4305379)
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AA seq
260 aa
AA seq
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MKIKILALVAVYANLAVAQQKQTTGPGMPSTWIDADTHHKIIRLTNNDRSNLSFYFHNNP
FAGNKMVYYSTEKTRDPAAKQETYNSNAKDRQLYLLDLKTLQSERLTNHSAPITGEIVSP
QRNEAFYQVKDSVFAVDLSTRKSRLVYVFPDDFKAGITTINADGTLLAGAKTSDTEKEIL
KQNPAKSSYFNLIYEAKLPRTLFTIDINTGKLNKIFTDSAWLNHIQFSPTDPSLLMFCHE
GPWHKVDRIWTIDVNSKDVK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaaatactggcattagttgcagtttacgccaatctcgctgttgcccagcaa
aagcaaaccaccgggcccggtatgccgagtacgtggattgatgcagacacgcatcacaaa
ataatacgtttaaccaataatgaccggagcaacctgagtttttatttccacaacaatcca
tttgcaggaaataaaatggtatactatagtacggaaaaaacccgggacccggctgcgaaa
caggaaacttacaatagcaatgcaaaagaccgccagctctacctgctcgatttaaaaaca
ttacagtcagaaaggcttactaatcattcggcgcccattaccggagaaattgtttctccc
caacgcaatgaggcattttaccaggtaaaggatagtgttttcgccgttgatctttcgacc
cggaaatcaagactggtttatgtgttccccgatgattttaaagcgggcataaccactatc
aatgctgatggcactttattggccggagctaaaaccagtgatacagaaaaagaaatatta
aaacagaatccggccaaaagcagttacttcaatctcatatacgaagccaaacttcccaga
accttatttaccattgatatcaataccggaaaactcaacaagatatttacagacagcgcc
tggctgaatcatatacagttctctcctaccgatccctcgttattgatgttttgtcatgaa
ggtccctggcataaggtagaccggatatggaccattgatgtcaacagcaaagatgtaaaa
tga
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