Niabella defluvii: KRR40_35650
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Entry
KRR40_35650 CDS
T10250
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ndf Niabella defluvii
Pathway
ndf03030
DNA replication
ndf03430
Mismatch repair
ndf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KRR40_35650
03430 Mismatch repair
KRR40_35650
03440 Homologous recombination
KRR40_35650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndf03032
]
KRR40_35650
03400 DNA repair and recombination proteins [BR:
ndf03400
]
KRR40_35650
Enzymes [BR:
ndf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KRR40_35650
DNA replication proteins [BR:
ndf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KRR40_35650
DNA repair and recombination proteins [BR:
ndf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KRR40_35650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
QSregVF_b
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ULT40135
LinkDB
All DBs
Position
4568359..4569132
Genome browser
AA seq
257 aa
AA seq
DB search
MLQITKPIAFIDLETTGVNLGTDRIVEIAIVKLLPDGSKTVKRKLINPEMPISKTSIDVH
GITNEMVKDAPTFAQAAQELKQVLDDCDLAGYNSNRFDIPLLVEEFLRAGVDFDMKGRRM
VDVQNIFHKMEQRTLSAAYKFYCGKVLESAHSAEADAAATHEVLVAQLERYPELGNTIES
INKFLGDEMVVDFARRFVMQDGVEVFNFGKYKGQSIAEILTKEPQYYDWMMRGDFPQQTK
QKLTEIFTRTKLKGLKL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaattaccaaacctatagcatttatagacctggaaactaccggggtaaacctg
ggaacagacaggatcgtagaaatagctattgtgaagctgctgccggatggttcgaaaaca
gtgaaacggaaactgatcaatccagaaatgcccatatccaaaacatctattgatgttcac
ggcatcaccaacgaaatggtgaaggatgcacccactttcgcgcaggccgcgcaggagctg
aagcaggtactggacgactgtgacctggctggctataattctaacaggtttgatattcca
ttgctggtggaagagtttctacgtgcgggtgtagactttgacatgaaaggacgtcggatg
gtggatgtgcagaacatttttcataaaatggagcagcgaactttatctgcagcttacaag
ttttactgcggtaaggtattggaatcggctcactcagccgaagctgacgccgctgcaacc
cacgaggttttggtagctcagttagagcgttatccagagttggggaataccatcgagtcg
atcaataaatttttgggcgacgaaatggtggtagattttgcccgcaggtttgtaatgcag
gatggagtagaagtatttaattttggaaaatacaaaggacagtcaattgcagaaatatta
actaaagaaccccagtattacgattggatgatgaggggtgattttcctcagcaaaccaag
caaaagcttacagaaatatttacccgcaccaagctgaaagggttaaagctttaa
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