Naumovozyma dairenensis: NDAI_0A04100
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Entry
NDAI_0A04100 CDS
T02234
Symbol
NDAI0A04100
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ndi
Naumovozyma dairenensis
Pathway
ndi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NDAI_0A04100 (NDAI0A04100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndi03019
]
NDAI_0A04100 (NDAI0A04100)
03041 Spliceosome [BR:
ndi03041
]
NDAI_0A04100 (NDAI0A04100)
Messenger RNA biogenesis [BR:
ndi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
NDAI_0A04100 (NDAI0A04100)
Spliceosome [BR:
ndi03041
]
Complex B
Other components
Prp19-related factors
NDAI_0A04100 (NDAI0A04100)
Complex C
NDAI_0A04100 (NDAI0A04100)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_8
TPR_2
NRDE-2
ARM_TT21_C
Mad3_BUB1_I
RNAseD_HRDC_C
Motif
Other DBs
NCBI-GeneID:
11493574
NCBI-ProteinID:
XP_003667810
UniProt:
G0W429
LinkDB
All DBs
Position
1:complement(928255..930801)
Genome browser
AA seq
848 aa
AA seq
DB search
MEAFLNEDDIAFEYELQKDPQNLTAWKRYLDHWKSQLRDPNNKNSKRTEDLIEWLYERLL
LQFVDDGELWMEYITWQNDRFMANKFKYSKMTLIFQKCLDTCQEKTPTDIYFMFLDFALE
QYDLKLIREVFDISITRLKIQDQGTLWGKIIEFIYEKFLPLTFADEEDENDVEQDQYDEL
QLLIYKTLFATDNEITSKNNEETDFANVWASHFLRRYILVCPPSAVEQVLQALYNTKDYN
TAIEIYKQSMRETKGTSTSYLPTKGSSFDINLNYLKMLESLKLEKEYELFAEELEKQFPT
ECLTVTILKAKHYIKQAKFDQFEELLQKSLKATSSVHDFTILYNLHLNFEQAFLETIINE
LKDNKTLQTDPKWEELLSSHFQIAQDLTVNYKLKMNNLKLRQNPNMISTWNERVALFEAK
SKKVEVYTEAIMKIDPLKVITRGVFGKLWVSYAQIYWDSKNYDSARQIYESALKVPFPYI
EDLEEIWTTWINNELELDDGVQRCLLLLDTALIAPDHPDVIIDKFRASHGKVPAQTIVFN
SLKLWSLKIDLLEMVNSTFENEKIWKDKIIETYESAIKLKILSPMMFINYAHFLKNCGRT
LDSYQVYERAVAIFTPETQNEIWNIYLSEVVESSIISKEHIRELFDQSLRHLIQAGVDCK
ALFILYSKYEAEKNGLIKKSVDILLDGAKNNGEGRTYLNSRLTLWDMCISEAESNFGISV
ARELYEQAITALPNSKVIPYILKFAHLEAKSKEVTRAREIMEYGAKLLPPVENTDLWEHW
DKFELEYGNKETYKNMLRLKRQLENEMKIDTEEASHNDGNVQFVTAAASAKQQKTMTTSN
PEEIELDL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggaggctttcttgaatgaagatgacattgcatttgaatatgaactacaaaaggatcct
cagaatctaactgcttggaaacgatatctggatcactggaaatcacaattaagagacccc
aataataaaaacagtaagagaaccgaagatcttattgaatggttatacgagagattgcta
ttacaatttgttgatgatggagaactatggatggagtatataacttggcaaaatgacaga
tttatggccaataaatttaaatattcaaaaatgactctcattttccaaaaatgtttagac
acatgtcaagaaaagactcctactgacatatattttatgttcttggatttcgctctcgaa
caatatgacctgaaactaattagggaagtttttgatatttccattactcgattgaagata
caagatcaaggaaccttatgggggaaaataatcgaatttatttatgaaaaatttcttccc
ttgacttttgcagatgaagaggatgaaaatgatgtcgagcaagatcaatacgatgaactc
caacttttgatttataaaactttgtttgcgacagataatgagattacaagtaagaataat
gaagaaacggattttgctaatgtatgggcttcccactttttaagaagatacattttggta
tgcccaccgtcggcggtcgagcaagtattgcaggcattgtataacaccaaagattataac
actgcaattgagatatataaacaatcaatgagggagacaaaagggacttcaacatcatat
ctgccgacaaaaggttcatcttttgatataaatttaaattacctgaaaatgttagaatca
ttaaaactggaaaaggagtatgagctattcgctgaagaattggaaaagcagtttccaact
gagtgtctaactgtaacaatattaaaggcaaagcattacattaaacaagcgaaatttgat
caatttgaggagctcttgcaaaaatcgttgaaagctacttcatctgttcacgattttacg
attctttataatctgcatcttaatttcgagcaggctttcttggagacaattattaatgag
ttaaaagacaataaaactttacagactgatcccaaatgggaagagcttttatcttctcat
tttcaaatcgcgcaagatctaactgtaaattacaagttgaaaatgaataatctaaagtta
agacagaatccgaatatgatatcaacatggaatgaaagagttgcattatttgaagcaaag
agtaagaaagtggaagtatataccgaggctataatgaaaattgaccctctgaaagtaatt
actcgaggagtatttgggaagctttgggtaagttatgctcagatatactgggatagtaaa
aattatgatagtgcaagacagatatatgaaagtgcactgaaagtccctttcccatatata
gaagacttggaagaaatatggacaacatggataaataatgaactagagttagatgacggt
gtacaaagatgtcttttattattagatactgcattaatagctccagatcatcctgatgtg
attatagataaatttagagccagtcatgggaaggtccctgcacaaacaattgttttcaat
tcgttaaagttatggtcattaaaaatagatttgttagaaatggtaaattcaacctttgag
aatgagaagatttggaaggataaaatcatagagacatatgagagtgcaattaaactgaaa
attttatcgcctatgatgtttataaactacgcccattttctaaaaaactgtggaagaact
ttggatagctatcaggtttatgaaagggctgttgcaatatttacacctgaaacgcaaaat
gagatttggaatatctacctgtccgaagtggttgaaagttcaataatctctaaagaacac
ataagggaactgtttgatcagtcactacgacacttaatacaagcaggtgttgactgtaaa
gcattgtttatcctctacagtaaatatgaagctgagaaaaatggcttgattaaaaaatca
gtggacatcttattagatggggccaaaaataatggtgaaggtcgtacttacttaaatagt
cgactcactttatgggatatgtgcatttctgaagcagaatctaatttcggtatttctgtc
gcaagagaactttatgaacaagctattacagcgttacctaattcgaaagtgattccttac
atcctaaagtttgcacatttagaagctaaaagtaaagaagttacaagggcaagagaaata
atggaatatggtgcaaagttgttgccaccagtagaaaatacagatttatgggaacattgg
gacaaatttgagctagaatatggtaacaaagaaacatataaaaatatgttgaggttaaaa
aggcaacttgagaacgaaatgaagatagatacagaggaagcaagtcataatgatggcaac
gttcaattcgttacagcagcggctagtgcaaaacagcaaaaaactatgactactagcaat
ccagaagagatagagcttgatttataa
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