Naumovozyma dairenensis: NDAI_0B00770
Help
Entry
NDAI_0B00770 CDS
T02234
Symbol
NDAI0B00770
Name
(RefSeq) hypothetical protein
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
ndi
Naumovozyma dairenensis
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndi03019
]
NDAI_0B00770 (NDAI0B00770)
Enzymes [BR:
ndi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NDAI_0B00770 (NDAI0B00770)
Messenger RNA biogenesis [BR:
ndi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
NDAI_0B00770 (NDAI0B00770)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
IstB_IS21
PhoH
MotA_ExbB
Motif
Other DBs
NCBI-GeneID:
11498292
NCBI-ProteinID:
XP_003668354
UniProt:
G0W5Q0
LinkDB
All DBs
Position
2:complement(172508..178384)
Genome browser
AA seq
1958 aa
AA seq
DB search
MSVSYSVTSAGSYMQAMQTMIEASHSFNIDREKVSIPTIDNEIKKEHSSEHDNTTTLTVL
AQDKNEWDDIYKEFDDISFEQLQSVVESYKKGNVTSIYHKINRLVRSCTSSMPPDSLLDS
VIQLTFTYEKGELAKELLDFLGPENIELLSFLLEHRNQLINQPVEDVLQQIRNSENNGPR
LLSQKDIRNQVLQNAESAKNQKLDPAQKVVKYPHVFRKYEASGSSSLSFSGQKFSLPLGT
TRTSFQTFEEIIIPAADPSTNKKFVFTKLLKVEDLDYYCRSVFKYETLNQIQSLVYPVAY
RTNENMLICAPTGAGKTDIALLAILNAIKQFSTANDDGEIDIQYDDFKVIYVAPLKALAA
EIVAKFSEKLSVFDIKVRELTGDMQLTKSEIIETQVIVTTPEKWDVVTRKANGDNDLVSK
VKLLIIDEVHLLHEDRGSVIETLVARTLRQVESSQSMIRIVGLSATLPNFMDVADFLGVN
RQVGMFYFDQSFRPKPLEQQLLGCRGKDGSKQSKENIDKTSYEKLLEMIQRGYQVMVFVH
ARKETVKSSRTFIKMAQSNAEIDLFAPDPSTKDRYSKQLAKNRDKDLKELFQFGFGVHHA
GMSRSDRNLTEKMFKDGAIKVLCCTATLAWGVNLPADCVIIKGTQVYDSKKGGFIDLGIS
DVIQIFGRAGRPGFGSAHGTGILCTSNDRLDHYVSLITQQHPIESKFGAKLVDNLNAEIS
LGTVTNVEEAIQWLGYTYMFVRMKKNPFTYGIEWDEVASDPQLYERRKRMIVTAARRLHS
LQMIVFDEISMHFISKDLGRVSSDFYLLNESVEIFNQMCDPRATEADVLSMISMSSEFDG
IKFREEEAKELTGLSDSAVECQVGGALDTPQGKTNVLLQAYISQSRIMDSALSSDANYVA
QNSVRICRALFLIGVNRRWGNFSKVMLDICKSIEKRLWSFDHPLCQFDLPENIIHQIRTK
RPSMEHLLELEPEELGELLHNKKMGGKLYSLLSRFPKIQIETEIFPISSNVMRVHVTLKP
DFIWDGRIHGDAQFFWVMVEESDKSQILHFEKFILNRRYVKNPHEMDFMIPLSDPLPPQI
VVKAVSDTWIGCESTHAISFQHLIKPHNETLQTKLQRLRPLPTTALHNSLIESIYPFKYF
NPMQTMTFHTLYNTNENVFVGSPTGSGKTVVAELAIWHAFREFPGKKIVYIAPMKALVRE
RVDDWSKRFTPVTGDKVVELTGDSLPDPRDVRDATIVITTPEKFDGISRNWQTRKFVKDI
SLVIMDEIHLLASDRGPILEMIVSRMNYIASKTGQPIRLLGMSTAVSNAHDMAGWLGVKN
NGLYNFSSSVRPVPLKMYIDGFPDNLAFCPLMKTMNKPAFMAIKQHSPDKPALIFVASRR
QTRLTALDLIHLCGMEDNPRRFLNIDDEEELRYYISQVTDDTLKLALQFGIGLHHAGLVE
KDRSISHRLFEQNKVRILIATSTLAWGVNLPAHLVIIKGTQFFDKKIQGYKDMDLTDILQ
MMGRAGRPAYDTSGTAIVYTKESKKMFYKHFLNVGFPVESSLHKVLDDHMGAEITSGTIT
NKQEALDFLNWTFFFRRAHHNPTYYNIEVDTGDAGVSKHLSELIDSTLENLKESRCISIH
GTDIEPTPFLSVASYYYISHKTIRLLLKQIYNKATFRDVLKWLSLAVEYDDLAVRGGETI
MNVELSAQSRYSGESTFTGEWELPIFDPHVKAFLLLQAYLSRADLPIADYIQDTVSVLEQ
SLRILQAYIDVASELGYFETVLTMIKVMQCIKQGCWYEDDQTSTLPGCTLTRHVDMEFTE
QGYPLQPKQGLLSLNEIGTFSYKKLQSLIRKFNIDDEDTKQFLYITQRLPVLKDIGFKKQ
IDNDKITLTASHSNNKSTKGFEVYCSKFPKIQKELWFLIGYEGSELVLLKRCQPRQHGKE
VVLSCDLLIPEELQNHKIYFLLVNDAMDIKYQLSHKIL
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtttcatattcagtgacgtctgctggctcatatatgcaggcaatgcagactatg
atcgaagcctctcactcttttaatattgatcgagaaaaggtttcaatcccaactatagac
aatgaaataaaaaaagagcactcatctgagcatgataacactaccacattgactgtgcta
gcccaagataagaatgaatgggatgatatttataaagaattcgatgatatatcgtttgaa
caactacaatctgttgtcgaatcctataaaaaaggaaatgtgacatctatttatcataaa
attaatcgattggttcgatcatgtacatcatcaatgcctccagattcactattagattca
gttattcaattgacatttacatatgaaaaaggtgaactagcaaaggaattattggacttc
ttgggccctgaaaatattgaattgctttcgttcttattggaacataggaaccagctgatt
aaccagcctgtagaagatgtcctgcaacagattagaaactcagaaaataatggaccgcgt
cttttatcacaaaaggatattaggaaccaagtattacagaatgcagaatcagcaaaaaat
cagaagttagatccagctcaaaaagttgtcaaatatccacatgttttcaggaaatatgaa
gccagtggatcatcttcactttcgttcagtggacagaaattttccttacctttgggaact
acaagaacttcctttcaaacatttgaagaaattattattcccgcagcagatccctctacc
aataagaaatttgtatttacaaaattgttgaaggtggaagatttggattactattgcagg
tctgtcttcaaatatgaaactttgaatcaaattcaatcgttggtatatcctgttgcttat
agaacaaatgagaatatgctaatctgtgcaccaacaggtgcaggtaaaacggatatcgcc
cttttggcaattttaaatgcaatcaaacagttttcaacggcgaatgatgatggtgaaata
gatatccaatatgacgattttaaagtcatatacgtagctccattaaaggccttggctgca
gaaattgttgccaagtttagtgagaaactgtctgtctttgatatcaaagtcagggaattg
actggggatatgcaattaacgaaatctgaaattatagagactcaagtaattgttactacg
ccagaaaaatgggatgttgtaacacgtaaagcaaatggggataatgatttggtttctaaa
gttaaacttctaattattgatgaagtacatttattgcatgaggatagaggttcggtcatt
gagacattggttgctcgtaccttaagacaggttgaaagctctcaatccatgataagaatt
gtaggtttatctgccactttgcccaattttatggatgtagcagatttcctgggagtaaat
agacaagtggggatgttttacttcgatcagtcattccgtcctaaacctttagaacaacaa
ttgcttggctgtagaggaaaagacggtagtaaacaaagtaaggaaaatattgataaaaca
tcatatgagaaattactggagatgattcaaagaggatatcaagtaatggtttttgtgcat
gcaagaaaagagacggtcaagagctcgaggacctttatcaaaatggcccaatcgaatgct
gaaatagatcttttcgctcctgatccctccacgaaggatagatattcaaaacaattggcg
aaaaatagagataaagatttaaaggaactgtttcaatttggattcggtgtgcatcatgcg
ggcatgtcaagatcagatcgtaatttaactgagaaaatgtttaaagatggagcaattaaa
gttttatgttgtactgccactttggcctggggtgtgaatcttcctgccgattgtgtaatt
ataaaaggaacacaagtctatgactctaaaaaaggtggttttatcgatttaggcatatcc
gatgtcattcaaatcttcggtcgtgctggtagaccaggttttggttctgcacacggtaca
ggtattctttgtacatcaaatgatcgtcttgatcattatgtttcattgataacacaacaa
catccaattgaatctaagttcggagcaaaattagtggacaacctgaatgcagaaatctct
ttaggtacagttacgaacgtcgaggaagctatccaatggttaggttatacttacatgttt
gttagaatgaagaaaaatccatttacttatggtatcgagtgggatgaggtcgcctctgat
ccacaactctatgaaaggaggaaacgaatgatcgttactgcagcacgaaggttgcactcc
ttacagatgattgtctttgatgaaatatctatgcattttatttccaaagatcttggtaga
gtctcttcagacttttacttattgaacgaatccgttgaaatcttcaatcaaatgtgtgac
ccacgtgccactgaagcagacgtactatcaatgatcagtatgagtagtgagtttgatggt
attaaatttagagaagaagaggcgaaggaattaactgggctttcagattctgcagtagaa
tgtcaggttggtggtgccttggacacaccacaaggtaaaactaacgttttattacaggct
tatatttcacagagtaggattatggactctgcattgtcatcggatgcaaactatgtcgcc
cagaattctgtcagaatctgtcgtgccttatttttgattggggttaatagaagatggggt
aatttttcgaaagtcatgctagatatttgcaaatctattgaaaagagactgtggtcattt
gatcatcctttatgtcagttcgacttgcccgaaaacatcatccatcaaattcgcaccaag
cgtccttccatggaacatctactcgaacttgaaccggaggagttaggtgagcttcttcat
aataaaaaaatgggtggtaaattgtatagtttattaagtcgtttcccaaaaattcaaatt
gaaacagagatatttcccatttcttctaacgtcatgagagtacatgttactttgaagccg
gatttcatatgggatggtagaatacatggtgatgctcagttcttctgggtgatggttgag
gaatcagataaatcacaaattttacatttcgaaaaattcattttgaacagacgttacgtg
aaaaatcctcatgaaatggatttcatgatcccgctttccgatccattgccaccacagatt
gttgtcaaagctgtgtcggacacttggattggttgtgaatctacacatgctatatccttc
cagcacttgattaaaccgcacaatgaaactttacaaactaaactgcaacgtttgaggccg
ctaccaacaacagctcttcataactctctcattgaaagtatttacccgttcaagtacttt
aatccaatgcaaactatgacatttcatactttatataataccaatgaaaatgtattcgtt
ggttcacctactggttcaggtaaaactgttgttgcagaattggccatctggcatgcattt
agagaatttcctggtaagaaaattgtgtatatcgcaccaatgaaggcgttagttagagaa
agagttgatgattggagtaaaagattcacaccagtgacaggagataaagtagttgaattg
actggtgattctctgcccgatcctcgtgatgtcagggatgctactatcgtaattaccaca
cctgaaaaatttgatggtatctcacgtaattggcaaactcgtaaatttgtgaaggatatt
tcattagttattatggatgaaattcatttattggcaagtgatcgtggtccaattttagag
atgattgttagtcgtatgaactatattgcatcgaaaacgggtcaaccgattcgtctgctt
ggtatgtcaactgctgtttcgaatgcccatgatatggctggatggcttggcgtaaaaaat
aatggtttatacaatttctcatctagtgtacgtccagttccattgaagatgtacatagat
ggtttcccagataatttagcattttgtccattaatgaaaactatgaataagcctgctttt
atggcaattaaacaacattctcctgataagcctgctttgatttttgttgcatctcgtaga
caaacaagattaacggcgttagatctgattcacttatgtggtatggaagataatccaagg
agatttttgaatattgatgacgaagaagagctacggtattatatttcccaagtaactgat
gatacgttgaaactagctttacaatttggtattgggctacatcatgctggtttagtggaa
aaagatcgttcaatttcacatcgacttttcgagcaaaacaaagttcgaattttaattgcg
acatctacattagcatggggtgttaacttacctgcacatttagttattatcaaaggtact
caattctttgacaagaaaattcaaggatacaaagatatggatctaacagatattttgcaa
atgatgggaagagctggtagaccagcatatgacactagtggtacagccattgtttatact
aaagaatcaaagaagatgttttacaaacatttcttaaatgtcggattccccgtcgaatct
tcgctacataaagtactagatgaccatatgggtgctgaaataacatctggtactattaca
aacaagcaagaggctcttgattttttgaattggacctttttcttccgtagagctcaccac
aatcctacttattataatatcgaagttgatactggagatgcaggtgttagcaaacatctg
agtgaattaatcgactctactctggaaaacttaaaggaatcccgatgtatttctatacat
ggtactgatattgaaccaaccccgttcttaagcgttgcatcctattattatatttcgcat
aagacaatccgtttactattgaaacaaatttataacaaggcaacatttagagacgtttta
aaatggttatcattagctgttgaatatgatgatttagctgttagaggtggcgaaactata
atgaatgttgaattatctgcccaatcgagatattctggtgaaagtactttcacgggagaa
tgggaattaccaatattcgatcctcatgttaaggcctttttattattacaagcatattta
agtcgtgctgatttaccaattgctgattatattcaagatactgtctctgttttagaacaa
tcgctacgtattttgcaggcctatattgatgtggcaagtgaattgggttatttcgaaaca
gtattaaccatgatcaaagttatgcaatgtattaaacaaggatgctggtatgaagatgac
caaactagtactttgccagggtgtacattaacgagacatgtcgatatggaatttactgaa
cagggatatcctttacaacctaaacagggattgttgtcattgaatgaaattggtactttt
agttataaaaaattacaaagtttgataagaaagtttaatattgatgatgaagacactaaa
cagttcttatatattacacaacgattacccgttttgaaagacattggctttaagaaacag
atagataatgacaaaataactttaactgcgtcccattccaataataaatctactaaagga
tttgaagtgtattgtagtaaatttccaaaaatacagaaagaactttggtttttgattggt
tatgaaggctcggaattggtactactaaaaagatgtcaaccacgtcagcatggtaaagaa
gttgttctttcttgtgatttattgatacctgaagagttgcaaaaccataagatttatttc
ttattggtaaatgatgcgatggatattaaataccaattatctcataaaattttgtaa
DBGET
integrated database retrieval system
