Naumovozyma dairenensis: NDAI_0B05340
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Entry
NDAI_0B05340 CDS
T02234
Symbol
NDAI0B05340
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ndi
Naumovozyma dairenensis
Pathway
ndi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NDAI_0B05340 (NDAI0B05340)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndi03019
]
NDAI_0B05340 (NDAI0B05340)
Messenger RNA biogenesis [BR:
ndi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NDAI_0B05340 (NDAI0B05340)
mRNA degradation factors
5'-3' decay
Lsm complex
NDAI_0B05340 (NDAI0B05340)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
UPF1_Zn_bind
Peptidase_S49_N
Motif
Other DBs
NCBI-GeneID:
11498471
NCBI-ProteinID:
XP_003668810
UniProt:
G0W706
LinkDB
All DBs
Position
2:1304436..1304987
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AA seq
183 aa
AA seq
DB search
MSASAVSQEVKEPQQQQQQQQQSKQQSKQSKKAHKKLSEGEADLYLDQYNFTTTAAIVSS
VDRKIFVLLRDGRLLFGVLRTFDQYANLILQHCVERIYLSEENKYAEQELGIFMIRGENV
VMLGEVDIDKEDQPLELMERISFKDASKIKKNNDEKKFKSETKKGKEYARFGLIYDFHKS
DLY
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatccgctgtttctcaggaggtcaaagaaccgcaacaacagcagcagcaacaa
caacaatcgaagcaacaatccaaacagtccaagaaagctcataagaaactttcagaggga
gaagcagatttatatctagaccaatacaattttaccactactgcagctatagtgagctct
gttgatcgtaaaatctttgtccttttacgtgatggtagactattattcggtgtcttaaga
acatttgatcaatatgcaaatttgatactacaacattgtgtggaaagaatatatttaagc
gaggaaaataaatatgcggaacaagagttgggtatttttatgattcgtggtgaaaacgta
gttatgttgggtgaagtggatatagataaagaagatcaaccattggaattaatggaacgt
atatcatttaaggatgcttctaagattaagaagaacaatgacgagaagaaattcaaatca
gaaactaagaagggtaaagaatatgctcgtttcggtctaatttatgatttccataaatcg
gatctttattaa
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