Naumovozyma dairenensis: NDAI_0C01250
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Entry
NDAI_0C01250 CDS
T02234
Symbol
NDAI0C01250
Name
(RefSeq) hypothetical protein
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ndi
Naumovozyma dairenensis
Pathway
ndi03020
RNA polymerase
ndi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NDAI_0C01250 (NDAI0C01250)
09124 Replication and repair
03420 Nucleotide excision repair
NDAI_0C01250 (NDAI0C01250)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndi03021
]
NDAI_0C01250 (NDAI0C01250)
03400 DNA repair and recombination proteins [BR:
ndi03400
]
NDAI_0C01250 (NDAI0C01250)
Enzymes [BR:
ndi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NDAI_0C01250 (NDAI0C01250)
Transcription machinery [BR:
ndi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
NDAI_0C01250 (NDAI0C01250)
DNA repair and recombination proteins [BR:
ndi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NDAI_0C01250 (NDAI0C01250)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
11496401
NCBI-ProteinID:
XP_003669029
UniProt:
G0W7M5
LinkDB
All DBs
Position
3:257434..261117
Genome browser
AA seq
1227 aa
AA seq
DB search
MSNEQGQEEEYYDDEAYGFEDANAPITAEDSWAVISSFFREKGLVSQQLDSFNQFVDYTL
QDIISEDSTLILEQLAQHTTESDNISRKYEISFGKIYVTKPMVNESDGVTHALYPQEARL
RNLTYSSGLFVDVKKRTYEAVDVPGRELKYELIAEESEDDSESGKVFIGRLPIMLRSKNC
YLSDATESDLYKLKECPFDMGGYFIINGSEKVLIAQERSAGNIVQVFKKAAPSPISHVAE
IRSALEKGSRFISTLQVKLYGREGSSARTVKATLPYIKQDIPIVIIFRALGIIPDGEILE
HICYDVNDWQMLEMLKPCVEDGFVIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKE
FLPHITQLEGFESRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKT
LFRKLTKDIFRYMQRTVEEANDFNMKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGV
SQVLNRYTYSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNL
SLMSCISVGTDPMPIITFLSEWGMEPLEDYVPHQSPDATRVFVNGVWHGVHRNPARLMDT
LRTLRRKGDINPEVSMIRDIREKELKIFTDAGRVYRPLFIVEDDESLGHKELKVRKGHIN
KLMATEYQDIEGGFEDVEEYTWTSLLNEGLVEYIDAEEEETILIAMQPEDLEPPAVNEDE
PMVDDLDPAKRIRAVQHATTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQSAMGKQA
MGVFLTNYNVRMDTMANILYYPQKPLGTTRAMEYLKFRELPAGQNAIVAIACYSGYNQED
SMIMNQSSIDRGLFRSLFFRSYMDQEKKYGMSITETFEKPQRTNTLRMKHGTYDKLDDDG
LIAPGVRVSGEDVIIGKTTPISPDEEELGQRTAYHSKRDASTPLRSTENGIVDQVLITTN
QDGLKFVKVRVRTTKVPQIGDKFASRHGQKGTIGITYRREDMPFTAEGIVPDLIINPHAI
PSRMTVAHLIECLLSKVAALSGNEGDASPFTDITVEGISRLLREHGYQSRGFEVMYNGHT
GKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERDC
MIAHGAASFLKERLMEASDAFRVHVCGNCGLMSVIAKLNHNQFECKGCDNKIDIYQIHIP
YAAKLLFQELMAMNITPRLYTDRSRDF
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgaacaaggacaagaagaagaatattacgatgatgaagcatacggtttcgaa
gatgcaaatgctccaatcacagcagaagattcatgggcagtaatctcatcattcttccgt
gagaaaggtttagtttcccaacaattagactcattcaatcaattcgtcgattatacttta
caagatatcatctctgaagattctactttgatcttggaacaactagctcaacatactacg
gaatcagataatatcagtagaaaatacgaaattagctttgggaaaatttatgtgacaaaa
ccaatggttaatgaatctgatggggttactcatgctttatatccacaagaagcacgttta
cgtaatttgacttattcttcagggttattcgtagatgttaaaaagagaacttatgaagca
gtagatgtcccaggaagagaattgaaatatgaattgattgcagaagaatctgaagatgat
agtgaaagtgggaaagtttttataggtagattaccaatcatgttaagatctaaaaattgt
tatctaagtgatgccactgaatctgatttatataaattaaaagaatgtccattcgatatg
ggtggttatttcattattaatgggtctgaaaaagttctaattgctcaagaacgttcagca
gggaatatcgttcaagtgtttaagaaagctgctccatcacctatctctcatgtggcagaa
attagatccgctttagaaaagggttccagattcattagtactttacaagtgaaattatac
ggtcgtgaaggtagttctgctcgtaccgttaaggcaactttaccatatattaaacaagat
atccctatcgttattatctttagagctctcggtattattccagatggtgaaattctagaa
catatctgttatgatgttaatgattggcaaatgttagaaatgttaaaaccttgtgtggaa
gatgggttcgttatacaagatcgtgaaactgcattagatttcattggccgtcgtgggact
gcattaggtatcaagaaggaaaagagaattcaatacgctaaagatattttacaaaaggaa
ttcttacctcatataacacaattagaaggttttgaaagtaggaaggctttcttccttggt
tatatgatcaatagattgttattatgtgctttagatcgtaaagatcaagatgatcgtgat
cattttggtaaaaaaagattagatttggcaggtccattattagcacaacttttcaaaact
ttatttagaaaattgactaaagacattttccgttatatgcaaagaacagtggaagaagca
aacgatttcaatatgaaattagccattaatgctaagacaatcacttcaggtcttaaatac
gctttagcaacaggtaattggggggaacaaaagaaggcaatgtcttcaagagctggtgtg
tctcaagtcttgaatcgttatacttattcatcaacattatcacatttaagaagaacaaac
actccaattggtcgtgatggtaaattagcaaaaccacgtcaattacataatactcattgg
gggttggtttgtcctgcagaaactccagaaggtcaagcgtgtgggttagtcaagaattta
tcattgatgtcatgtatatccgtcggtacagatccaatgccaattattacattcttaagt
gaatggggtatggaaccattggaagattatgtcccacatcaatctcctgatgctacaaga
gttttcgttaacggtgtttggcatggtgttcatagaaaccctgcaagattaatggataca
ttaagaactttaagaagaaaaggtgatattaatccagaagtttctatgattagagatatt
cgtgaaaaggaattgaaaattttcacagatgcagggagagtttatagaccattatttatt
gtagaagatgatgaatcattaggtcataaagaattaaaggtaagaaagggtcatatcaat
aagttaatggctacagaatatcaagatattgaaggtggatttgaagatgtagaagaatat
acatggacatcgttattaaatgaagggttagtagaatatattgacgctgaagaagaagaa
acaatcttaattgctatgcaaccagaagatcttgaaccaccagcggtgaatgaagatgaa
cctatggtagatgatttagaccctgctaaacgtattagagctgtacaacatgcaacaacg
tttacacattgtgaaattcatccttcaatgattcttggtgtagcagcatctattattcca
ttccccgatcataaccaatctccacgtaatacttaccaatctgctatgggtaaacaagct
atgggtgttttcttaacaaattataatgtacgtatggatactatggctaatatcttatat
tatcctcaaaaacctttaggtactactcgtgctatggaatatttgaaatttagagaactt
cccgcaggtcaaaatgctatcgttgccattgcatgttattcagggtataatcaagaagat
tctatgattatgaatcaatcatctattgatcgaggattattcagatcattatttttcaga
tcatacatggatcaagaaaagaaatatggtatgtctatcactgaaacttttgaaaaacca
caacgtaccaatactttaagaatgaaacatggtacatatgataaattagatgatgatggg
ttaattgctccaggtgtaagagtttcaggtgaggatgtgattattggtaagaccactcca
atatcgccagatgaagaagaactagggcaaagaacagcatatcattccaaacgtgatgct
tccacacctttaagaagtactgaaaatggtattgtggatcaagtgctaataacaacgaat
caagatgggctaaaatttgtcaaagttcgtgttagaacgacgaaagttccacaaattggt
gataaatttgcgtctcgtcatggtcaaaagggtacaattggtattacgtatcgtagagaa
gatatgccattcacagcagaaggtattgttcctgatttaattatcaatcctcacgctatt
ccatctcgtatgactgtggcgcacttaattgaatgtttgttaagtaaagttgctgcttta
tcaggtaacgaaggtgatgcatctccatttacagatatcacagtggaaggtatttcccga
ttactacgtgaacatgggtatcaatctcgtgggttcgaagttatgtataatggtcataca
ggtaagaaattaatggctcaaattttctttggtccaacatattatcaacgtttaagacat
atggtggacgataagattcatgcaagagctcgtggtccaatgcaagtgttaactagacaa
cctgtggaaggtagatcaagagatggtgggttaagatttggtgaaatggaacgtgattgt
atgattgcccatggtgctgcatcattcttaaaggaaagattaatggaagcttcagatgcc
tttagagttcatgtttgtggtaattgtgggctgatgtccgttattgctaaattgaaccat
aaccaatttgaatgtaaaggttgtgataacaaaattgatatttatcaaattcatattcca
tatgctgctaaattattattccaagaattaatggccatgaacattactccacgtctatat
acagatcgttcaagagatttttaa
DBGET
integrated database retrieval system
