Naumovozyma dairenensis: NDAI_0C03340
Help
Entry
NDAI_0C03340 CDS
T02234
Symbol
NDAI0C03340
Name
(RefSeq) hypothetical protein
KO
K12856
pre-mRNA-processing factor 8
Organism
ndi
Naumovozyma dairenensis
Pathway
ndi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NDAI_0C03340 (NDAI0C03340)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ndi03041
]
NDAI_0C03340 (NDAI0C03340)
Spliceosome [BR:
ndi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
NDAI_0C03340 (NDAI0C03340)
Complex C
U5 SnRNP specific factors
NDAI_0C03340 (NDAI0C03340)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
11494739
NCBI-ProteinID:
XP_003669237
UniProt:
G0W883
LinkDB
All DBs
Position
3:complement(762096..769340)
Genome browser
AA seq
2414 aa
AA seq
DB search
MSDLPPLPPPPPPLFEDENNQEGSDHILPPAVEDNEMPDLPPPPPPLFDNEEDISENPLP
PPPPPMDFDEEPSTIPLPSLQPPHPHLVLTNEETNDLKRKYDSNISGEDNYTSVDIQPSK
KRINKKKFGGLIQSHKVDMPHEHLRKIIEGHSDMASKRFDYGKRAFLVALKYMPHAVLKL
LENMPQPWEQVKEVKVLYHITGAITFVNEIPRVIEPIYTAQWSTAWIAMRREKRDRTHFK
RMRFPGFDDDEPPLSYPEHIETIEPSDAITLPLDEKDDKWVKDWLYDPRPLADDKQHVNG
TSYKRWNLELETMANLYRLATPLRDEVTDNNYYYLFNKKTFFTSKALNTAIPGGPKFEPL
YPEEEEGDYSEFNLIDRIIFRVPIRSEYKIAFPHVYNSRPRSVEIPWYNDQISCLIDNNE
DPDLPPFFFNPSLNPITFTDVLEKVDMRNYSDDFSLPVDCLPLLEDEDFILPELKDAMSL
YHAPYPFNRRSGKTTRAQDIALVKKWYLQHPDEKYPVKVRISYQKLLKNYVANELKSKKP
INIKKIKLLKNLRNTKYFQQTTIDWVEAGLQLCRQGHNMLNLLIYKRGLTYLHLDYNFNL
KPTKTLTTKERKKSRFGNTFHLMREILKVVKLLVDAHTQYRLGNVDAFQLADGIYYILNH
LGQLTGIYRYKYKVMHQIRACKDLKHVVYYRFNKILGKGPGCGFWQPAWRVWIFFMRGII
PILERWLGNLLSRQFEGRSNEVVKTTTKQRVEAYYDLELRASVMNDILEMIPEGIRQNKA
RTILQHLSEAWRCWKANIPWDVPGMPEPIKNIIERYVKAKADRWVSSAHYNRERIQRGVH
VEKTVMKKNLGRLTRLWIKNEQERQNEIEKNGPEITPDEATSIFSTMVDWLDQRNFSPIP
FPPLTYKNDTKILVLALENLKDVYASKSRLNAAEREELALIEEAYDNPHDTLNRIKKYIL
TQRVFKPVDITMMEHFQSIAPVYTVDPLEKITDAYIDHYLWYEADQRKLFPNWIKPGDSE
IPPLLVYKWSQGINNISDVWDVSKGQSTVLLETQLDELAEKIDFTLLNRLLRLVMDQNIA
DYMTAKNNVILNFKDMSHVNKYGLLRGLQFASFIYQYYGFVIDLLILGPERASEMVGPVD
NPNDFMQFKSLEVEKKHPIRMYCRYLDRVYILLHFNERDADRLTDEYLAENPDPNFENAI
GYNNKKCWPRDARMRLLRQDVNLGRAVFWEIQGRVPSSLTVLDWSTSFASVYSKNNPNLL
FTMCGFEVRILPKHRTAEVLSTDEGVWDLINEATKQRTAKAFLKVSEEEITNFESRINGI
LMAAGSSTFTKIAAKWNTALISLFTYFREATVSSERLLDVLVKAETRIQNRVKLGLNSKM
PTRFPPAVFYTPKELGGLGMLSASHILIPASDLNYSRQTDTGITHFRAGMTHEEEKLIPT
IFRYIATWENEFLDSRRVWAEYATKRQEAFQQNRRLAFEELEGSWDRGIPRISTLFQRDR
HTLAYDRGHRIRREFKKYSLERNSPFWWTNAHHDGKLWNLNSYRTDVIQALGGIETILEH
TLFKGTGFTSWEGLFWEKASGFEDSLQFKKLTHAQRTGLSQIPNRRFTLWWSPTINRANV
YVGFVVQLDLTGIFLHGKIPTLKISLVQIFRAHLWQKIHESVVFDICQILDGELDILQIE
TVTKEAVHPRKSYKMNSSAADVTIDSTYQWEVSKPSLLHETNDRYNAALTNKMWVDVQLR
YGDYDSHDISRYVRAKFLDYTTDNVSMYPSPTGIMIGIDLAYNMYDAYGNWFNGLKPLVQ
NSMRTIMKANPALYVLRERIRKGLQIYQSNIQEPFLNSSNYAELFNDDIKLFVDDTNVYR
VTVHKTFEGNVATKAVNGCIFILNPKTGHLFLKIIHTSVWAGQKRLSQLAKWKTAEEVSA
LVRSLPKEEQPKQIIVTRKAMLDPLEVHMLDFPNIAMRPTELRLPFSASMSIDKLSDVVM
KATEPQMVLFNIYDDWLDRISSYTAFSRLILLLRGLKTDEEKAKMIILGDPTIPVKPHHL
WPSFSDEQWISIESEMRDLILNEYGKKYNVNISALTQTEIKDLILGQNIKAPSVKRQKMA
ELEAVKTGDNADVDNIGGSTVMKTKNINAQGEEIVVVTSSNYENQNFSSNNEWRKSAIAD
SLLYLRLKNIYISSDSFVEEKNVYVLPKNLLTNFVQISDVKIQIAGVLFGASPVDHPNIK
EVKTIVLIPQLGSSRGVNMSAAPNSQSHPYLENLELLGWIHTQTNEIKFMSANEVMTHTQ
LFEENYTDVIDLSVCSVPGSISLSAYNLNDEGYEWAKENRDVTSEIPEGFEPTFSSQAQL
LLSDRIIGNFLVPESNVWNFAFMGPSFNKEISYELKLDIPLDFYNEVHRTTHFLQFNELQ
GDEELEAEQQDPFA
NT seq
7245 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttaccaccactacctcctcctcctcctccactttttgaagatgaaaataat
caagaaggctccgaccatatattaccaccagcggtagaggacaatgagatgcctgactta
ccgccaccacctcctccactctttgacaatgaagaagacatctcagaaaatccactgccc
cctcctcctccaccaatggacttcgatgaagagccatctacgatacctcttccatcacta
caaccaccgcacccccacctagtactgacaaacgaagaaactaatgatttaaaaagaaaa
tatgattcaaatatatctggagaagataactatacttctgtggacatacaaccctccaag
aaaagaataaacaagaagaaattcggtggattaatacaatcacataaagtggacatgccc
cacgaacacttaaggaaaataatagaaggacattctgatatggcttctaaaagatttgat
tatggcaaacgtgccttcttagtcgcattaaagtatatgcctcatgcagtactgaaacta
ttagaaaatatgcctcaaccttgggaacaagttaaagaagttaaagttctataccatata
acaggtgccataacatttgtcaacgaaatcccaagggtaatagaacctatatatactgca
caatggtctactgcatggattgctatgagaagagagaaacgtgatagaactcacttcaaa
agaatgaggttcccagggtttgatgacgatgaacctccattatcctatccagaacatatt
gaaacaattgaaccatctgatgctatcactctaccattagatgaaaaagatgataaatgg
gtcaaagattggctttatgatccacgccccttggcagatgataaacagcatgtaaacgga
acatcatataaaagatggaacctggagttagaaactatggccaatctttatagactagca
actcctctaagagatgaagtcacagataataactattactatttgtttaataagaaaaca
tttttcacctcaaaagcattaaacacggctattccagggggacctaagtttgaaccatta
tatccagaggaagaagaaggagattatagcgagtttaatttaatagacaggataatattt
agagtaccaattcgaagcgaatataagattgcattccctcatgtatataactcaaggcca
cggtctgtggaaatcccatggtacaatgatcaaatttcatgcctcatagataataatgaa
gatccagaccttccaccgttctttttcaatccttctttgaacccgattacctttactgat
gttcttgagaaagtggatatgcgcaattattctgatgacttttcactccctgttgattgt
cttccattattagaagatgaagactttattttaccggagttgaaagatgccatgtctctt
taccatgcgccatacccttttaataggagatcaggaaagacaacgagggcacaagatatt
gctttagttaaaaaatggtatttacaacatccagacgaaaaatatccagtaaaagtaaga
atttcataccagaaacttctaaagaattatgtcgcaaatgaactaaaatcgaagaaacca
ataaacataaagaaaatcaaactattgaaaaatctgcggaataccaaatattttcaacaa
actactatcgattgggtcgaagcgggtttacagctttgtcgtcaaggacataatatgtta
aatctgctgatatataagagaggattgacatatttacatttagactataatttcaatttg
aagccaacgaaaacactgacaacgaaagaacgtaagaagtcaaggttcggtaatacgttc
catttgatgagggaaattttgaaagtcgttaaacttcttgtcgatgctcacactcaatat
aggcttggaaatgtcgacgctttccaattagctgatggtatttattatattcttaatcat
ctaggtcaacttactggtatttatcgttataaatataaggtcatgcatcagattcgggct
tgtaaagatttgaaacatgtagtttactaccggttcaataagattttgggtaagggaccg
ggatgtgggttctggcaaccagcatggagggtctggatctttttcatgagaggtattatt
ccaattttggaaagatggctaggtaatttgttaagtcgtcaatttgaaggtagatcaaat
gaagtcgtgaaaactacaacgaaacaaagagttgaggcatactatgatttagaattaaga
gcatccgtaatgaacgatatattagaaatgataccagaaggtataagacaaaataaggca
agaacaatactgcagcacctaagtgaagcgtggagatgttggaaagcgaatataccctgg
gatgtacctggtatgcctgaacccatcaaaaatatcatcgagagatacgttaaggctaaa
gcagatagatgggtttcatctgcacattataaccgcgaacgtattcaacgtggggtacat
gtcgaaaagacagtaatgaaaaaaaatttaggaagattaacaagattatggatcaagaat
gaacaagaaagacagaatgagattgaaaagaacggtccagagattacaccagatgaagca
acatcaatattctctacaatggttgattggcttgaccaacgaaatttctcaccaatcccc
ttccctcctttaacatataaaaatgatacaaaaattttggttcttgccttagaaaatctt
aaagatgtttatgcttcgaaatctagattgaatgccgctgaaagagaagaattagctttg
attgaagaagcatacgacaatcctcatgatacattaaatagaatcaagaaatatatttta
acacaaagggtatttaaaccggtcgatattacaatgatggaacacttccagtcaattgct
ccagtatatacagttgatccattagagaaaataaccgatgcttacattgaccactaccta
tggtacgaggctgaccaaagaaaactttttcctaattggatcaaaccaggtgattctgag
attccgccacttctagtttataaatggagtcaaggtataaataatatatctgatgtgtgg
gatgtttccaaagggcaatctaccgttcttttggaaactcaactagatgaattggccgag
aaaattgatttcaccttattgaataggttattacgtcttgtcatggaccagaatattgca
gattatatgacggcgaagaataatgttatattgaactttaaagatatgagccatgtcaat
aaatatggcctcttaagaggtctgcagtttgcttccttcatatatcaatattatggattc
gtgatcgacctcttgattttaggcccagaacgagcatccgagatggttggtcccgtcgat
aatccaaatgatttcatgcaattcaagagtttggaagtggagaaaaaacacccaataagg
atgtactgtagatacttagacagagtatacatattactccattttaatgaaagagatgcg
gaccggcttactgatgaatatcttgcagagaacccagatccaaacttcgagaacgccatt
gggtataacaataaaaaatgttggccaagagatgctcgtatgaggttgttgcgtcaagat
gtgaaccttgggcgcgcagttttctgggaaatccaaggccgtgttcctagctcattaaca
gttttagattggagcacatcgtttgcttccgtttatagcaagaataatccaaatttactt
ttcactatgtgcggattcgaagttagaatattacccaagcataggacagctgaagtcctt
tccacagatgaaggtgtatgggatcttatcaatgaagctactaaacaaaggacagccaag
gccttcttaaaggtttcagaggaagagattactaattttgagagcagaataaacggtatt
ttgatggcggcaggttcttcaactttcactaaaattgctgcaaaatggaatactgcacta
atatcgttattcacttatttcagagaggcaacagtctcttctgaaaggttactagatgtt
ttagtcaaagcagagacgaggattcagaatcgtgttaaattaggtttaaactctaaaatg
ccaacacgttttccaccagcagtattctacacaccgaaagaattaggtgggctcgggatg
cttagtgcatctcatatcttaattccagcctccgatcttaattattctcgacaaactgac
acgggtataacacattttagagctggtatgactcatgaagaagaaaagttaattccaaca
atattccgttacatagctacatgggagaatgaatttttagattcaagaagagtttgggca
gaatatgctacaaaacgtcaagaagctttccaacaaaaccgcagattggcttttgaagaa
ttagaaggttcatgggatagaggtatccctcgtatcagtacgctatttcaaagagatagg
cacaccttagcatatgaccgaggccatcgtattcgtagagagttcaagaaatattcttta
gaacgtaatagcccattttggtggactaacgctcaccatgatggtaaactttggaacttg
aattcgtaccgtacagatgtaatccaagcacttggtggtatagagacaattttagagcat
acactattcaagggtactggctttacctcatgggaaggtctattttgggagaaagcgtca
ggatttgaagactctcttcaattcaaaaagttgactcatgctcaaagaactggtctaagt
caaatccctaatcgtcgttttacactttggtggtcacctactattaatagagctaatgtt
tatgttggtttcgttgttcaattggatttgacaggtatattcttacatggtaaaatcccc
actttaaagatatcgttggttcaaatcttccgtgctcatttatggcagaaaattcatgaa
agcgttgtttttgatatatgtcagattttagatggtgaattagatattttacaaatagag
actgtaacaaaagaggcagtccatccacgtaaatcgtacaaaatgaattcgtcagcagct
gacgtgacaattgatagcacctaccaatgggaagtttcaaaaccttccttattacatgaa
actaacgataggtataacgctgctctaacaaataaaatgtgggttgatgttcaactaaga
tatggtgattacgattctcatgacatatctcgttatgttcgtgccaaattcttagactat
accactgataatgttagtatgtatccctctccaaccggtataatgatcgggattgatcta
gcatataacatgtatgatgcctatggtaattggtttaatggtttaaagccgttggttcaa
aatagtatgaggacaattatgaaagcaaaccctgccttatatgttttaagggaacgtata
agaaagggtctccaaatttatcaatctaatatccaagagccattcttaaattcgtcaaat
tatgctgaactatttaatgatgatattaaattatttgtcgatgatactaatgtttacaga
gttactgtgcataaaacttttgagggaaatgttgcaacaaaggcagtcaacggttgtatc
tttatattaaaccccaagacaggtcatttgttcttaaagattatccatacctctgtatgg
gcaggacagaaacgtctgagtcaattggctaaatggaaaacagctgaagaagtgagcgca
ttggttagatcattaccaaaagaggaacaaccgaaacaaattattgttacccgtaaggct
atgttagatccattggaagttcatatgcttgatttccctaatattgctatgagacctact
gaactaagattaccattttctgcatctatgtcgatcgataagttatctgacgttgttatg
aaagcaactgagccacaaatggtattatttaacatatatgatgattggctggatagaatt
tcttcttacactgctttctcgagattaattttactattacgtgggttaaagactgatgaa
gagaaagcgaagatgattatattaggtgatccaacgatcccagtcaaaccacaccattta
tggccttcattttctgacgaacaatggattagcattgagtcagagatgcgtgatttgatt
cttaatgaatatgggaagaaatataatgtgaatatctctgcattaacacaaacagaaatt
aaggacttaattttaggccaaaatattaaagcaccatctgtgaagaggcaaaaaatggct
gaattagaagctgtgaagacaggagataatgcagacgtagataatataggtggttctact
gttatgaaaactaagaatattaatgctcaaggtgaagaaattgtggtggtgacctcaagt
aattatgaaaaccaaaatttcagttcgaacaatgaatggagaaaatctgccattgctgac
agtttactatatttacgtttgaaaaatatatatatttcctcagacagttttgttgaagaa
aagaatgtttatgtcttgccaaaaaaccttttaactaattttgttcaaatatctgatgtg
aaaattcaaattgctggtgttttgtttggtgcttctccagttgatcatccgaatatcaag
gaagtcaagacaatcgtgttgataccccaattaggtagtagtagaggtgtcaatatgagt
gcggcaccgaatagtcaatcgcatccatatctggagaatctagaattacttggttggata
catacccaaacgaacgaaatcaaattcatgtcggcgaacgaagttatgactcacactcaa
ttattcgaagaaaactacactgatgtgatcgatctgtcagtttgctctgttcctggttca
atctctctatccgcatacaatttgaacgacgaaggttacgaatgggctaaagaaaatagg
gatgttacaagtgaaatacccgaagggtttgagcctacatttagctcacaagctcaattg
ttattatctgatcgaattataggtaatttcttagtcccagaatctaacgtgtggaacttt
gccttcatgggtccaagtttcaataaggagataagctatgaattgaaattagatatccca
cttgacttctataatgaagtacatcgtacgacgcatttccttcaattcaacgagttacaa
ggcgacgaagaattggaagctgaacaacaagatccatttgcatga
DBGET
integrated database retrieval system
