Naumovozyma dairenensis: NDAI_0E01750
Help
Entry
NDAI_0E01750 CDS
T02234
Symbol
NDAI0E01750
Name
(RefSeq) hypothetical protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ndi
Naumovozyma dairenensis
Pathway
ndi03013
Nucleocytoplasmic transport
ndi03015
mRNA surveillance pathway
ndi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NDAI_0E01750 (NDAI0E01750)
09122 Translation
03013 Nucleocytoplasmic transport
NDAI_0E01750 (NDAI0E01750)
03015 mRNA surveillance pathway
NDAI_0E01750 (NDAI0E01750)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndi03019
]
NDAI_0E01750 (NDAI0E01750)
03041 Spliceosome [BR:
ndi03041
]
NDAI_0E01750 (NDAI0E01750)
Enzymes [BR:
ndi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NDAI_0E01750 (NDAI0E01750)
Messenger RNA biogenesis [BR:
ndi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NDAI_0E01750 (NDAI0E01750)
Spliceosome [BR:
ndi03041
]
Complex C
Other components
EJC/TREX
NDAI_0E01750 (NDAI0E01750)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
NDAI_0E01750 (NDAI0E01750)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
11498881
NCBI-ProteinID:
XP_003670234
UniProt:
G0WB71
LinkDB
All DBs
Position
5:complement(346153..347505)
Genome browser
AA seq
450 aa
AA seq
DB search
MSHEGEEDLLEYSDNEQEIQVDATNAATESTEGAAGATDASATTEGDAAATTGADKRVPT
LVSIPLDSKYFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVF
VLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPINKDAE
LLKNKDTAPHIVVATPGRLKALVRDKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRA
TPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRK
LAQLLDDLEFNQVIIFVKSTNRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFE
KRICVSTDVFGRGIDIERINLAINYDLTSEPDQYLHRVGRAGRFGTKGLAISFVASKEEE
EVLAKIQERFDVKIAEFPEEGIDPSTYLNN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgaaggtgaagaagatctattagaatactctgataacgaacaagaaattcaa
gtcgatgctaccaatgcagctactgaatctactgaaggtgctgccggtgccaccgatgct
tccgctaccactgaaggtgacgctgctgccacgactggcgccgataaaagggttcctacg
ttggtatccattccactggattcaaagtatttcttattaaaaccagaattatcaagagcc
attatcgattgtgggttcgaacatccatctgaagttcaacaacatactatcccacaatct
attcacggtacagatgtcttatgtcaagctaaatctggtttaggtaagaccgctgtcttc
gtattatctactttacaacaattagaccctgtcccaggtgaagttgctgttgttgtcatt
tgtaacgcaagagaattggcttaccaaattcgtaacgaatatctaagattctctaaatat
atgccagatgttaagaccgctgtcttctatggtggtactccaattaataaagatgctgaa
ctattaaaaaataaagatacagctccacatattgtggttgccactccaggtcgtttaaag
gctttagttagagacaaatatattgatttatcacacgtaaagaacttcgtcattgacgaa
tgtgataaagttctggaagaattagatatgagaagagatgttcaagaaatctttagagct
actccaagagataaacaagtaatgatgttttcagccacgttatctcaagaaattagacca
atctgtagacgtttcttacaaaatccattagaaatcttcgtggatgatgaagctaagttg
acattacatggtttacaacaatactatatcaaattggaagaacgtgaaaagaaccgtaaa
ttagcacaattattagatgatttagaatttaatcaagttatcattttcgttaaatctaca
aatagagcaaatgaattaactaagttattaaatgcatctaacttccctgctattacggta
cacggtcatatgaaacaagaagaacgtattgctcgttataaagctttcaaagatttcgaa
aagcgtatttgtgtttctactgatgttttcggtagagggatcgatattgaacgtattaat
ttagctattaactacgatttaactagtgagccagatcaatatctacatcgtgttggtaga
gctggtagattcggtactaaaggtttagccatttctttcgttgcttcaaaggaagaagaa
gaagtgctagctaagatccaagaacgtttcgatgtcaagattgctgaattcccagaagaa
ggtattgatccatcaacttatttgaacaattaa
DBGET
integrated database retrieval system
