Naumovozyma dairenensis: NDAI_0F04000
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Entry
NDAI_0F04000 CDS
T02234
Symbol
NDAI0F04000
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ndi
Naumovozyma dairenensis
Pathway
ndi03440
Homologous recombination
ndi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NDAI_0F04000 (NDAI0F04000)
03450 Non-homologous end-joining
NDAI_0F04000 (NDAI0F04000)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndi03032
]
NDAI_0F04000 (NDAI0F04000)
03400 DNA repair and recombination proteins [BR:
ndi03400
]
NDAI_0F04000 (NDAI0F04000)
DNA replication proteins [BR:
ndi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
NDAI_0F04000 (NDAI0F04000)
DNA repair and recombination proteins [BR:
ndi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
NDAI_0F04000 (NDAI0F04000)
BRCA1-C complex
NDAI_0F04000 (NDAI0F04000)
NHEJ (non-homologous end-joining)
MRX complex
NDAI_0F04000 (NDAI0F04000)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_21
AAA_15
AAA_13
AAA_29
ABC_tran
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
11497056
NCBI-ProteinID:
XP_003670961
UniProt:
G0WD57
LinkDB
All DBs
Position
6:complement(948219..952136)
Genome browser
AA seq
1305 aa
AA seq
DB search
MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPNSK
GGVFVHDPKITGERDVRAQVKLAFTSANGITMIVTRNIQLLAKKTTNTFKTLEGQLAAIN
QNGDRSTLSTRSVELDTQVPLYLGVPKAILEYVIFCHQEDSLWPLSEPSNLKKNLNEIFQ
AMKFTKAIDNLKNIKKEMAIDIKLLKQSVEHLKVDRDRSKSTKMTIVQLQGQVDEYQGKV
TDIEKELKKITEQSDKLFKSNQEFQKVLSKVQNLKLLETHYREEIDNLSTSIELLSSSKQ
SLQELLSNFSTSLQEKENEVLQTENKITTLKNKANVQQSELTKLIRRQGELQAGKESYEK
NTNTLQTMAKEFSSRYKINFSDTDSMDSFIKLSSDFVSSLSVSLLSYESEATKAIRKAET
RSNEATKSETIQRQRLEYSRKDLEKLNTEIEKLTSEFKNNEYTKEDLEMERKKLEDYHEK
VRDWEKTDVITELNSKLKQKNDQMIISENELEQIQEKIMKTNQQADLFAKLGIMKKSLYE
KTEALNELIEKFNDDPKSKEWGLSANSDIDIDFKKYFINMQKQIALNNKDIHSSNKEYTE
SSIRLSNTQRELKKLKSTEEEITKRLEESLPEDCPIDEYNDVVVEAELSYKTALENLKMH
QTTLDFNRKALEIADRDNCCYLCARKFETDDFRGKILQQLRAKTDANFENTLKETVKEEK
EYLDGLRALERDFLSLTTCKDDYKSLTSRVDEYEKDVSRLKNKFDEFELKGENLKSDRDY
AERILRAICEEIVYLRKEVKSLEKNVQDVAEELRIYGDSDGGVQTVEELSHQQQEKNALL
RQLRKDVQDLQNERESKTREHSALLTVIKERNLKVNEIERGLQRSENIKKDIIAKEHEVD
TLGVRIQNLEEEINVLLGEKEIAAKLLNETRLEYNEEIESQRGNIDNIKRYLDRFNDLKS
DVDTFSTQGFAELEDCTVKLAKVQEDLEVAGKNIEETQDELNLHREKLKDSNNEKKNLEQ
NLRLIELQERLKETEVEVSGLNIQNAEAERDKYQQESSRLRNLFERLSAENAGKMGEVKQ
LQSQIEGLKHQLRSDYKDIDDKYHKNWVELQTRTFVTDDIETYSKALDSAIMRYHGLKMQ
DINRIIDELWKRTYTGTDIDTIKIRSDEVTSGVRGKSYNYRVVMYKQDAELDMRGRCSAG
QKVLASIIIRLALSETFGTNCGVIALDEPTTNLDEENIESLAKALNNIIGLRRHQKNFQL
IVITHDEKFLNHMNASQFTDHFFRIKRDDRQKSQIEWVDISKVSE
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctatttataagctatctattcaaggtattagatccttcgattccaatgacagg
gaaaccatcgagttcgggaagccactgacgttgatcgtaggtatgaatggttctggtaag
accacaattattgaatgtcttaaatatgctactacaggggatttgcctcccaatagcaag
ggcggtgtctttgttcacgatcccaagattacaggtgaaagagatgtcagagctcaagtg
aaactggcgtttacaagcgccaatggtattacaatgatcgttaccagaaatattcaactt
ttagccaagaaaaccaccaacacttttaagactttagagggtcaattagctgcaatcaac
cagaatggggatagatctactttgagcacaagatcagtggaattagacacccaagtccca
ttatatttaggtgttcctaaggcaattcttgaatatgttattttttgccatcaggaagat
agtttatggccgttaagtgaaccttccaatttgaaaaaaaatttgaatgaaatctttcaa
gcaatgaagttcactaaagcaattgataacttgaaaaatatcaagaaagaaatggctatt
gatattaaattactgaagcaatctgtagagcacttaaaagttgatagagatagatctaaa
agcacaaagatgaccatcgtccaattacaaggtcaagttgatgaatatcaaggaaaagta
accgatattgaaaaagaattgaagaaaattactgaacaatctgataaattatttaaatct
aatcaagagtttcaaaaggttttgtcgaaagtccaaaacttgaagctactagaaacgcac
tatagagaagaaattgacaatctatcaacctcaatagaattactatcatcatcaaaacaa
tccttacaagaattgttatcgaacttttccacatcattacaagaaaaggaaaacgaagtg
ctacagacagaaaataagattactacattgaaaaataaagcaaacgttcagcaatctgaa
ttaacgaagttaataaggagacaaggtgaattacaagcgggtaaagaatcatatgaaaag
aatactaacacattacaaacaatggcaaaggaattttctagtcgctataaaataaacttc
tctgatactgactcgatggatagttttatcaaactctcttcagatttcgttagcagttta
tcagtaagtttactttcatatgaaagtgaagcaacgaaagcaatcagaaaagctgagact
aggtccaatgaagcaacgaaatcagaaacgattcaaagacaaagactagaatatagtaga
aaggatctggaaaaattaaatactgagattgaaaagttaaccagtgaatttaaaaataat
gaatatactaaggaagatcttgaaatggagaggaagaaattagaagactatcatgaaaag
gttagagattgggaaaagactgatgtaataaccgaacttaattctaaactcaaacagaaa
aatgaccaaatgatcatctctgaaaatgaacttgaacaaattcaagaaaagatcatgaag
actaatcaacaagctgatttgtttgccaaattaggaatcatgaagaaatctttgtatgag
aaaactgaagccttaaatgaattgattgagaaatttaatgatgaccctaagagtaaagaa
tggggactatcggctaattccgatattgatattgattttaagaaatattttattaacatg
cagaaacaaatcgcactgaataataaagatattcatagtagtaataaggaatatacggaa
tctagtattcggttatccaatacgcagagagaattgaagaaacttaagagtacagaggaa
gaaatcaccaagagactcgaagaatccctaccggaggactgtcccatcgatgaatataat
gatgtcgttgtcgaagcagagttgtcctataagaccgctttagagaatttgaagatgcat
caaaccacgttagatttcaacagaaaagcattagagattgccgacagagataattgttgt
tatttatgtgctagaaaattcgaaacagatgatttcaggggtaaaatattacaacaatta
agggctaagacggatgctaattttgaaaacactttgaaagaaacagtaaaggaagagaaa
gaatatttagatggtttaagagcattggaacgagatttcttgtcattgacgacttgtaaa
gatgattataagagtttaacatcgcgtgttgatgaatatgaaaaagatgtctcgcgattg
aaaaataaatttgatgaatttgaattgaaaggtgagaatttaaaaagcgatagggattat
gctgaaaggattttacgtgcaatttgtgaagaaatcgtttatttaaggaaagaagtgaaa
tctttggaaaagaatgttcaagatgttgcagaagaattaaggatatatggggactcagat
ggtggggtacaaacagtggaagaattaagccatcaacaacaagagaagaatgcattgtta
cgtcaactaagaaaagatgttcaagatttacaaaatgagagagagtcaaaaacaagggaa
cattctgcattgcttacagtgattaaagaaagaaacttgaaagtaaatgaaattgagagg
ggattgcaaagaagtgaaaatattaaaaaggatattattgcgaaagaacatgaagttgat
acacttggtgttagaatccaaaatctggaagaagaaatcaatgtactattaggtgaaaaa
gaaatagctgcaaaattattgaatgaaacaaggctagaatataatgaggaaattgaatcc
caaaggggtaatattgataatatcaagagatatttggatcgtttcaatgacctaaaatct
gatgtggatacattctctacacaaggttttgctgaattggaagactgtactgttaaactt
gcaaaagttcaagaggatttagaagttgccggcaaaaatatcgaagagacacaggatgag
ttgaacttacatagagaaaaattgaaagattctaataatgagaagaaaaatcttgagcaa
aatttaaggctgattgaattacaagaacgtttaaaggaaacagaggttgaagtttcaggg
ttaaatattcaaaatgctgaagctgaaagagataaatatcaacaagaatcatcacgctta
agaaatctgtttgaaagattaagtgcagagaatgccggtaagatgggtgaagttaaacaa
ttacaaagccaaattgaaggattaaaacaccaactacgttctgattataaagatattgat
gataaatatcataagaattgggttgaattacaaacaaggacgtttgtaactgatgatata
gaaacatattctaaagctcttgatagtgctattatgagataccatggtttgaagatgcaa
gatatcaatagaatcattgatgagctatggaagagaacatatacaggtacagatattgat
actattaagatacgatctgatgaggtcacgagtggcgttagaggtaaatcatataattat
cgtgttgttatgtataagcaggatgcagaattagatatgaggggtagatgttcagcaggt
caaaaggttttagcatcaataattattagattagcgttatctgaaacatttggtacgaac
tgtggtgttattgcgttagatgaaccaacaactaatttggatgaagagaatattgaaagt
ttagctaaggcactaaacaatataattgggctaagaagacatcaaaagaatttccagtta
attgttattacgcatgatgagaagtttttgaatcatatgaacgcgtctcaatttacagat
catttctttagaataaaacgtgacgatagacaaaaatcacaaattgaatgggttgatata
agtaaagtttccgagtaa
DBGET
integrated database retrieval system
