KEGG   Naumovozyma dairenensis: NDAI_0H02120
Entry
NDAI_0H02120      CDS       T02234                                 
Symbol
NDAI0H02120
Name
(RefSeq) hypothetical protein
  KO
K14326  regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
Organism
ndi  Naumovozyma dairenensis
Pathway
ndi03013  Nucleocytoplasmic transport
ndi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ndi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    NDAI_0H02120 (NDAI0H02120)
   03015 mRNA surveillance pathway
    NDAI_0H02120 (NDAI0H02120)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ndi03019]
    NDAI_0H02120 (NDAI0H02120)
Enzymes [BR:ndi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     NDAI_0H02120 (NDAI0H02120)
    5.6.2.5  RNA 5'-3' helicase
     NDAI_0H02120 (NDAI0H02120)
Messenger RNA biogenesis [BR:ndi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     NDAI_0H02120 (NDAI0H02120)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     NDAI_0H02120 (NDAI0H02120)
SSDB
Motif
Pfam: UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 UvrD-helicase ResIII SLFN-g3_helicase Viral_helicase1 DEAD NPHP3_N nSTAND3 NAT10_TcmA_helicase PhoH AAA_22 T2SSE AAA_16 ATPase
Other DBs
NCBI-GeneID: 11495917
NCBI-ProteinID: XP_003671629
UniProt: G0WF25
LinkDB
Position
8:complement(515322..518303)
AA seq 993 aa
MGTETVTSHHKDLINNEDDELFYNSKGDLVTIDQIATELEELEDEYEEQEQRDKLLQDLD
SHHVEHVSEHACSYCGIDSPTCVVKCNSCDRWFCNSKNGTTSSHIVNHLVLSRHNVVSLH
PDSDLGDTVLECYNCGCKNVFLLGFVSAKSEAVVVLLCRIPCAQTKNVNWDTDQWQPLIE
DRQFLSWVAEEPSEEEKLKARLITPSQISKLEAKWRSNKDATINDIDAPEEQEEIPPLLL
RYQDAYEYQRSYGPLIKLEADYDKQLKESQALEHISVTWSLALNNRHLASFALSTFETNE
LKVAVGDEMILWYSGLQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAE
FIWKGTSYDRMQDSLKKFAVDKKSISGYLYYKILGHQVVDITFDVPMPKQFSIPHFTQLN
ESQSKAVQHVLQRPLSLIQGPPGTGKTVTSATIVYHLTKIHKDKVLVCAPSNVAVDHLAA
KLRDLGLKVVRLTAKSREDVESSVSNLALHNLVARGSKGELRKLLRLKEEVGELSASDTK
RFVKLVRKTESEILAKADVVCCTCVGAGDKRLDTKFRTVLIDESTQATEPECLIPIVKGA
KQVILVGDHKQLGPVILERKAGDAGLKQSLFERLISLGHIPFRLEIQYRMNPYLSEFPSN
MFYEGSLQNGVTIEQRTVSDSTFPWPIHGVPMMFWANYGREELSSNGTSYLNRIEAMNCE
RIITKLFKDGVKPEQIGVITPYEGQRAYILQYMQMNGAMDKDLYVKVEVASVDAFQGREK
DYIILSCVRANDQQAIGFLRDPRRLNVGLTRAKYGLVILGNPMSLSRNLLWNHLLIHFRE
KGCLVEGTLDNLQLCTVQLSRPQPKKRQNVDANGFQYNVGTDMMGLPNVQDFDTQSLMSF
GAAGATNFNNNGGDFSNYLNNDYWNFDNFNPSVYENANNSVNKYNNTSENNIYSKDGQPL
DSNYAAELERNQQMNTNHDVTKDLNKNFGSLNI
NT seq 2982 nt   +upstreamnt  +downstreamnt
atgggtacagaaactgttaccagccaccacaaggatctcatcaacaatgaagatgatgaa
ttattttacaattctaaaggtgatttagttactatcgatcaaattgccactgaattagaa
gaattagaagatgaatatgaagaacaagaacagagagacaagctgttacaagatttggat
tctcatcatgttgaacatgtctctgaacatgcatgttcctattgtggaatcgattcacct
acttgcgttgtcaaatgtaatagttgtgatagatggttttgtaattctaaaaatggtaca
acaagctctcatatcgttaatcatttggttttatctcgccataatgtcgtttctttacat
cctgattcagacttaggtgatacagttttggaatgttataattgtggttgtaagaacgta
tttcttttagggtttgtttccgctaagagtgaagctgttgttgtattattatgtagaatt
ccatgcgcacagactaagaatgttaattgggatactgatcaatggcaaccattaattgaa
gataggcaatttttatcatgggtggcagaggaaccaagtgaagaagaaaaattgaaagct
aggttaattactccaagtcaaatttcaaaattggaagctaaatggagatcgaataaagat
gctacgattaatgatattgatgcgccagaagaacaagaggaaatacctcctttattatta
agataccaagacgcatatgaatatcaaagatcctacggtccattaatcaaattggaagct
gattatgataaacaattaaaggagtcccaagcgttggaacatatctcagtgacctggtcc
cttgcattaaataacagacatttagcatcgtttgcattatctactttcgaaacaaatgaa
ttaaaagtcgctgtgggtgatgaaatgatcttatggtattctggtttacaacatcctgat
tgggaaggtcgcggttatattgttcgtctacctaatagtttccaagatactttcacctta
gaattaaaacccagcaagacaccaccaccaacacacttaactacaggatttacagcagaa
ttcatttggaaaggtacatcctatgatagaatgcaagattcattgaagaaattcgccgta
gataagaaatccatttctggttatttgtattataaaatcttaggtcatcaagtggtcgac
attacatttgatgtccctatgccaaaacaattctccatcccccattttacccaactgaat
gaatcacaatcaaaagctgtacaacatgtgttacaaagacccttatcattaattcaaggg
ccgccagggacagggaaaactgtcacttctgctaccattgtgtatcatctaaccaaaatt
cacaaggataaagttttagtttgtgctccttctaacgttgcagtagatcatttggccgca
aaattaagagacttgggattaaaagttgtcagattgacagcaaagagccgagaagatgtg
gagagttctgtgtcaaacttagcattacataatttagtcgcaagaggatccaaaggtgaa
ttaagaaaattattaagactgaaagaagaagtcggcgaattatcagcaagtgatacgaaa
agatttgttaaattagttaggaaaactgaatctgagattttggctaaagctgacgtcgtt
tgttgtacttgtgttggggcaggtgacaaaaggttagataccaaatttagaaccgttctt
atcgatgaaagtactcaggccactgaaccagaatgtttgattcctattgtgaaaggtgca
aaacaagttatcttggttggtgatcataaacaattgggtcctgttatattagaaaggaaa
gctggtgatgctggtttgaagcaatctttgtttgaacgattaatatcattaggtcatatt
ccctttaggttagaaattcaatatcgtatgaatccatatttaagtgaattcccaagtaac
atgttttatgaaggttcattacaaaacggtgtcactattgaacaaagaactgtatcggat
agtacattcccatggcctattcatggcgttccaatgatgttttgggcaaattatggtaga
gaagaactatcgtccaatggtacttcatatttaaatagaatcgaagcaatgaattgtgaa
cgtattataacaaaacttttcaaagatggcgtcaaaccagaacaaattggtgttattaca
ccatatgagggacaaagagcgtatatcttacaatatatgcaaatgaatggtgctatggat
aaagatttatatgttaaagttgaagtcgcatcagtcgatgcattccagggtcgtgaaaag
gattatattatcttatcatgtgttcgtgctaatgatcaacaagcaatcgggtttttacgt
gatccacgtcgtttgaatgttggtttaactcgtgctaaatatgggcttgttatcttaggg
aatccaatgtcactatcgaggaatcttctatggaatcatttattaattcattttagagaa
aaaggttgtcttgtagaaggtactttagataatttacaattatgtacagttcaattatca
agaccgcaacctaagaagcgtcaaaatgtcgatgctaatggttttcaatacaatgtcggt
acagatatgatgggtcttccaaatgtacaagattttgatacccaaagtttgatgtcattc
ggcgctgctggtgccacaaatttcaacaataatggtggtgatttctcaaactacttaaat
aatgattattggaattttgataacttcaacccatcagtttatgaaaatgcgaataattcg
gtgaataaatacaataatacatctgaaaataatatttacagtaaagatggacaaccatta
gattctaattatgctgccgaattagaacgtaatcagcaaatgaacactaatcatgatgtc
actaaggatttgaacaaaaattttggctcattgaatatttaa

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