Naumovozyma dairenensis: NDAI_0H02120
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Entry
NDAI_0H02120 CDS
T02234
Symbol
NDAI0H02120
Name
(RefSeq) hypothetical protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
ndi
Naumovozyma dairenensis
Pathway
ndi03013
Nucleocytoplasmic transport
ndi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NDAI_0H02120 (NDAI0H02120)
03015 mRNA surveillance pathway
NDAI_0H02120 (NDAI0H02120)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndi03019
]
NDAI_0H02120 (NDAI0H02120)
Enzymes [BR:
ndi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NDAI_0H02120 (NDAI0H02120)
5.6.2.5 RNA 5'-3' helicase
NDAI_0H02120 (NDAI0H02120)
Messenger RNA biogenesis [BR:
ndi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
NDAI_0H02120 (NDAI0H02120)
mRNA cycle factors
Common to processing body (P body) and stress granule
NDAI_0H02120 (NDAI0H02120)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
UvrD-helicase
ResIII
SLFN-g3_helicase
Viral_helicase1
DEAD
NPHP3_N
nSTAND3
NAT10_TcmA_helicase
PhoH
AAA_22
T2SSE
AAA_16
ATPase
Motif
Other DBs
NCBI-GeneID:
11495917
NCBI-ProteinID:
XP_003671629
UniProt:
G0WF25
LinkDB
All DBs
Position
8:complement(515322..518303)
Genome browser
AA seq
993 aa
AA seq
DB search
MGTETVTSHHKDLINNEDDELFYNSKGDLVTIDQIATELEELEDEYEEQEQRDKLLQDLD
SHHVEHVSEHACSYCGIDSPTCVVKCNSCDRWFCNSKNGTTSSHIVNHLVLSRHNVVSLH
PDSDLGDTVLECYNCGCKNVFLLGFVSAKSEAVVVLLCRIPCAQTKNVNWDTDQWQPLIE
DRQFLSWVAEEPSEEEKLKARLITPSQISKLEAKWRSNKDATINDIDAPEEQEEIPPLLL
RYQDAYEYQRSYGPLIKLEADYDKQLKESQALEHISVTWSLALNNRHLASFALSTFETNE
LKVAVGDEMILWYSGLQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAE
FIWKGTSYDRMQDSLKKFAVDKKSISGYLYYKILGHQVVDITFDVPMPKQFSIPHFTQLN
ESQSKAVQHVLQRPLSLIQGPPGTGKTVTSATIVYHLTKIHKDKVLVCAPSNVAVDHLAA
KLRDLGLKVVRLTAKSREDVESSVSNLALHNLVARGSKGELRKLLRLKEEVGELSASDTK
RFVKLVRKTESEILAKADVVCCTCVGAGDKRLDTKFRTVLIDESTQATEPECLIPIVKGA
KQVILVGDHKQLGPVILERKAGDAGLKQSLFERLISLGHIPFRLEIQYRMNPYLSEFPSN
MFYEGSLQNGVTIEQRTVSDSTFPWPIHGVPMMFWANYGREELSSNGTSYLNRIEAMNCE
RIITKLFKDGVKPEQIGVITPYEGQRAYILQYMQMNGAMDKDLYVKVEVASVDAFQGREK
DYIILSCVRANDQQAIGFLRDPRRLNVGLTRAKYGLVILGNPMSLSRNLLWNHLLIHFRE
KGCLVEGTLDNLQLCTVQLSRPQPKKRQNVDANGFQYNVGTDMMGLPNVQDFDTQSLMSF
GAAGATNFNNNGGDFSNYLNNDYWNFDNFNPSVYENANNSVNKYNNTSENNIYSKDGQPL
DSNYAAELERNQQMNTNHDVTKDLNKNFGSLNI
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagaaactgttaccagccaccacaaggatctcatcaacaatgaagatgatgaa
ttattttacaattctaaaggtgatttagttactatcgatcaaattgccactgaattagaa
gaattagaagatgaatatgaagaacaagaacagagagacaagctgttacaagatttggat
tctcatcatgttgaacatgtctctgaacatgcatgttcctattgtggaatcgattcacct
acttgcgttgtcaaatgtaatagttgtgatagatggttttgtaattctaaaaatggtaca
acaagctctcatatcgttaatcatttggttttatctcgccataatgtcgtttctttacat
cctgattcagacttaggtgatacagttttggaatgttataattgtggttgtaagaacgta
tttcttttagggtttgtttccgctaagagtgaagctgttgttgtattattatgtagaatt
ccatgcgcacagactaagaatgttaattgggatactgatcaatggcaaccattaattgaa
gataggcaatttttatcatgggtggcagaggaaccaagtgaagaagaaaaattgaaagct
aggttaattactccaagtcaaatttcaaaattggaagctaaatggagatcgaataaagat
gctacgattaatgatattgatgcgccagaagaacaagaggaaatacctcctttattatta
agataccaagacgcatatgaatatcaaagatcctacggtccattaatcaaattggaagct
gattatgataaacaattaaaggagtcccaagcgttggaacatatctcagtgacctggtcc
cttgcattaaataacagacatttagcatcgtttgcattatctactttcgaaacaaatgaa
ttaaaagtcgctgtgggtgatgaaatgatcttatggtattctggtttacaacatcctgat
tgggaaggtcgcggttatattgttcgtctacctaatagtttccaagatactttcacctta
gaattaaaacccagcaagacaccaccaccaacacacttaactacaggatttacagcagaa
ttcatttggaaaggtacatcctatgatagaatgcaagattcattgaagaaattcgccgta
gataagaaatccatttctggttatttgtattataaaatcttaggtcatcaagtggtcgac
attacatttgatgtccctatgccaaaacaattctccatcccccattttacccaactgaat
gaatcacaatcaaaagctgtacaacatgtgttacaaagacccttatcattaattcaaggg
ccgccagggacagggaaaactgtcacttctgctaccattgtgtatcatctaaccaaaatt
cacaaggataaagttttagtttgtgctccttctaacgttgcagtagatcatttggccgca
aaattaagagacttgggattaaaagttgtcagattgacagcaaagagccgagaagatgtg
gagagttctgtgtcaaacttagcattacataatttagtcgcaagaggatccaaaggtgaa
ttaagaaaattattaagactgaaagaagaagtcggcgaattatcagcaagtgatacgaaa
agatttgttaaattagttaggaaaactgaatctgagattttggctaaagctgacgtcgtt
tgttgtacttgtgttggggcaggtgacaaaaggttagataccaaatttagaaccgttctt
atcgatgaaagtactcaggccactgaaccagaatgtttgattcctattgtgaaaggtgca
aaacaagttatcttggttggtgatcataaacaattgggtcctgttatattagaaaggaaa
gctggtgatgctggtttgaagcaatctttgtttgaacgattaatatcattaggtcatatt
ccctttaggttagaaattcaatatcgtatgaatccatatttaagtgaattcccaagtaac
atgttttatgaaggttcattacaaaacggtgtcactattgaacaaagaactgtatcggat
agtacattcccatggcctattcatggcgttccaatgatgttttgggcaaattatggtaga
gaagaactatcgtccaatggtacttcatatttaaatagaatcgaagcaatgaattgtgaa
cgtattataacaaaacttttcaaagatggcgtcaaaccagaacaaattggtgttattaca
ccatatgagggacaaagagcgtatatcttacaatatatgcaaatgaatggtgctatggat
aaagatttatatgttaaagttgaagtcgcatcagtcgatgcattccagggtcgtgaaaag
gattatattatcttatcatgtgttcgtgctaatgatcaacaagcaatcgggtttttacgt
gatccacgtcgtttgaatgttggtttaactcgtgctaaatatgggcttgttatcttaggg
aatccaatgtcactatcgaggaatcttctatggaatcatttattaattcattttagagaa
aaaggttgtcttgtagaaggtactttagataatttacaattatgtacagttcaattatca
agaccgcaacctaagaagcgtcaaaatgtcgatgctaatggttttcaatacaatgtcggt
acagatatgatgggtcttccaaatgtacaagattttgatacccaaagtttgatgtcattc
ggcgctgctggtgccacaaatttcaacaataatggtggtgatttctcaaactacttaaat
aatgattattggaattttgataacttcaacccatcagtttatgaaaatgcgaataattcg
gtgaataaatacaataatacatctgaaaataatatttacagtaaagatggacaaccatta
gattctaattatgctgccgaattagaacgtaatcagcaaatgaacactaatcatgatgtc
actaaggatttgaacaaaaattttggctcattgaatatttaa
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