Naumovozyma dairenensis: NDAI_0I01950
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Entry
NDAI_0I01950 CDS
T02234
Symbol
NDAI0I01950
Name
(RefSeq) hypothetical protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ndi
Naumovozyma dairenensis
Pathway
ndi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NDAI_0I01950 (NDAI0I01950)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndi03021
]
NDAI_0I01950 (NDAI0I01950)
03019 Messenger RNA biogenesis [BR:
ndi03019
]
NDAI_0I01950 (NDAI0I01950)
Transcription machinery [BR:
ndi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NDAI_0I01950 (NDAI0I01950)
Messenger RNA biogenesis [BR:
ndi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NDAI_0I01950 (NDAI0I01950)
U7-dependent histone pre-mRNA processing factors
NDAI_0I01950 (NDAI0I01950)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
11493696
NCBI-ProteinID:
XP_003672007
UniProt:
G0WG53
LinkDB
All DBs
Position
9:454599..456872
Genome browser
AA seq
757 aa
AA seq
DB search
MLDAGIHPAYQGMASLPFYDDFDLSTVDVLLISHFHLDHAASLPYVMQKTNFNGRVFMTH
PTKAIYRWLLRDFVRVTSIGVNSPLDREENLYTNEDLVESFDKIETVDYHSTIDVNGIKF
TAFHAGHVLGAAMFQIEIAGMRVLFTGDYSREKDRHLNSAEVPPLSSNILIVESTFGTAT
HEPRLNREKKLTQMIHHTVSHGGRVLMPVFALGRAQELMLILDEYWAQHAEELGDGQVPI
YYASNLARKCMSVFQTYVNMMNDDIRKKFRDSQTNPFIFKNISYLKNLEEFQDLGPSVML
ASPGMLQSGLSRDLLERWCPDEKNLVLITGYSIEGTMAKYLMLEPDTIPSVNNPEVTVAR
RCNIEEISFAAHVDFQENLEFIQKINATNIILVHGESNPMGRLKSAILSNFNALKGTENE
VHVFNPRNCVDVDLEFKGVKIAKAVGNIVDEIDKDDLENLLSTDTAQSSDGSEKHQSKED
GTAKAVEEEETTNQDTVHDVVVSGILVSDEKNYDLNLVSLSDLREHHTELSTTILRERQT
VYVNCKKELIYWHICQMFGVVDVLVDEEDITHKLNVKIEKEIEDGTISKESSKLILKVMG
DIRLTVVDNMAILEWTQGLISDTVADSIIAILMSVDSAPASVKMSSTCNHSHGHDEVSDN
TAKIEEELEQHSQVWKIKQISNLFREQFGETFTIFLDKLTEAKSNDTEDILGAVTIGKNE
ARINFSKMRVEECNSNPLKGRVESLLKIGSDLVASLC
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgttggatgcaggtattcatcctgcatatcaaggtatggcatcattgccattttatgat
gattttgatttatcgactgtagacgtattattaatttcccatttccatttggatcatgct
gcgtcattaccatatgttatgcaaaagacaaattttaatggtagagtattcatgacacac
cctaccaaggcaatttatagatggctactgagagactttgtacgagtgaccagtattggt
gtcaattctccattagatagagaagaaaatttatataccaacgaagacttagtggaatcc
tttgataagattgaaactgtcgattatcactcgacaattgatgtcaatggtattaagttc
acagcattccatgcggggcatgtactgggggcagctatgtttcaaattgagattgctggt
atgagagtcttgtttacaggtgattattctcgtgagaaagatagacatttaaattcagca
gaagttccaccattgtcatcgaatatccttattgtggaatctacatttggtacagctaca
catgaaccgcgtttgaatagggaaaagaaattgacccaaatgattcaccatacagtatcc
catggtggaagagtgttgatgcctgtgttcgctcttggaagagctcaagaattaatgttg
attcttgatgaatattgggctcaacatgcagaagaactaggagacggacaagtaccaata
tactatgcgtctaatttggcgaggaagtgtatgagtgtattccaaacgtatgttaatatg
atgaatgatgatatccgtaaaaagttcagagattctcaaaccaatccatttatatttaaa
aacatatcctatttgaaaaatctggaagagttccaagatttaggaccaagtgttatgtta
gcttcgcctggtatgttacaaagtggtctttccagggatttattggaaagatggtgccct
gatgaaaagaatttagtattaattacgggttattccatcgaaggtactatggccaaatat
ttaatgttagagccggatacaattccatctgttaataatccggaagttactgtggcaaga
cgttgtaatatagaggagatatcttttgcagcacatgttgatttccaggaaaaccttgaa
tttattcaaaaaattaacgcaacaaatataattctggtacatggggaatcgaatccgatg
ggtcgtctgaaatcagccatcttatctaactttaatgctctaaaaggtactgaaaacgaa
gttcatgttttcaatcctagaaattgtgtagatgttgatttagaattcaagggagtgaaa
atagcgaaagctgttggaaatattgtagatgagattgataaagatgatttggagaactta
ctttctacagatacagcgcaatcatcagatggaagcgaaaaacaccagtctaaagaagat
ggtacggccaaagcagtggaagaggaggaaacgacaaatcaagatactgtacatgacgta
gttgtatctggaattttagtttccgacgaaaaaaattatgatttaaatctcgtatcgtta
tctgatctgagagaacaccatactgaattatcaacaactatattgagagaaaggcaaaca
gtatatgtaaattgtaagaaagagttgatatattggcatatttgtcaaatgttcggtgtc
gttgatgttctagtggacgaagaagacattacacataaattgaatgtgaaaatagaaaaa
gaaatcgaggatggtacgatatcaaaagaatctagtaaactgatcttaaaggttatgggt
gatattcgattaactgttgtggacaatatggccattttggaatggacacaaggtttgata
agcgatactgttgcggattctatcattgccatacttatgagtgttgactctgcaccagca
agtgtgaaaatgagtagtacatgtaatcattcccatggtcatgacgaggttagtgataat
accgctaaaatagaagaggaattagaacagcatagtcaagtatggaaaataaagcaaata
tcgaatttgtttagagaacaatttggcgaaacatttacaatatttctagataaattaacc
gaagctaagtcaaacgacacagaagatattctcggagctgtcaccattgggaaaaatgag
gcacgtataaacttttccaagatgagagtagaagaatgtaattccaatccattgaaaggt
cgtgtagaaagtttactgaagatcggttcagatctagtggcatctttatgttag
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