Nocardioides dokdonensis: I601_0098
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Entry
I601_0098 CDS
T04431
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk00521
Streptomycin biosynthesis
ndk00523
Polyketide sugar unit biosynthesis
ndk00541
Biosynthesis of various nucleotide sugars
ndk01100
Metabolic pathways
ndk01110
Biosynthesis of secondary metabolites
ndk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
I601_0098 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
I601_0098 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
I601_0098 (rfbC)
Enzymes [BR:
ndk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
I601_0098 (rfbC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ANH36552
UniProt:
A0A1A9GFX9
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All DBs
Position
98179..98736
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AA seq
185 aa
AA seq
DB search
MQVERARFDGVLVFTPQPLHDDRGLFVRTYDADVAGEHGLRPETFLQDSLSRTHRGVVRG
LHLRTGRGEAKLVRCSHGALFDVVVDLRPGSSTFGQWEGFELTGESQRSVYIPAGCAHGF
QSLTEPADTSYRIDRRHDPAESLTFAHDDPELGVQWPLPVVGLSAADRAAPPLSEVRHLL
GAAAR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggagcgggcacggttcgacggggtgctcgtcttcaccccccagcccctgcac
gacgaccgtggcctcttcgtgcgcacctacgacgccgacgtggccggcgagcacgggctg
cgacccgagacgttcctccaggacagcctgtcgcgcacgcaccgcggcgtcgtgcggggc
ctgcacctgcgcacgggccgcggcgaggccaagctggtgcgctgctcccacggggccctc
ttcgacgtcgtggtcgacctgcggccgggctcgtcgaccttcgggcagtgggagggcttc
gagctcaccggcgagagccagcgctcggtctacatcccggccggctgcgcgcacggcttc
cagtcgctcaccgagccggccgacacgtcgtaccggatcgaccgccggcacgacccggcc
gagtccctgacgttcgcccacgacgaccccgagctcggtgtgcagtggccgctgcccgtc
gtcgggctctcggccgcggaccgcgcggccccgccgctcagcgaggtgcgacacctgctc
ggcgccgcggcacgctag
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