Nocardioides dokdonensis: I601_0223
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Entry
I601_0223 CDS
T04431
Symbol
lpdC
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk00010
Glycolysis / Gluconeogenesis
ndk00020
Citrate cycle (TCA cycle)
ndk00260
Glycine, serine and threonine metabolism
ndk00280
Valine, leucine and isoleucine degradation
ndk00310
Lysine degradation
ndk00380
Tryptophan metabolism
ndk00620
Pyruvate metabolism
ndk00630
Glyoxylate and dicarboxylate metabolism
ndk00640
Propanoate metabolism
ndk00670
One carbon pool by folate
ndk00785
Lipoic acid metabolism
ndk01100
Metabolic pathways
ndk01110
Biosynthesis of secondary metabolites
ndk01120
Microbial metabolism in diverse environments
ndk01200
Carbon metabolism
ndk01210
2-Oxocarboxylic acid metabolism
ndk01240
Biosynthesis of cofactors
Module
ndk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ndk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ndk_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ndk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
I601_0223 (lpdC)
00020 Citrate cycle (TCA cycle)
I601_0223 (lpdC)
00620 Pyruvate metabolism
I601_0223 (lpdC)
00630 Glyoxylate and dicarboxylate metabolism
I601_0223 (lpdC)
00640 Propanoate metabolism
I601_0223 (lpdC)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I601_0223 (lpdC)
00280 Valine, leucine and isoleucine degradation
I601_0223 (lpdC)
00310 Lysine degradation
I601_0223 (lpdC)
00380 Tryptophan metabolism
I601_0223 (lpdC)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
I601_0223 (lpdC)
00670 One carbon pool by folate
I601_0223 (lpdC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ndk04147
]
I601_0223 (lpdC)
Enzymes [BR:
ndk01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
I601_0223 (lpdC)
Exosome [BR:
ndk04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
I601_0223 (lpdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
HI0933_like
FAD_binding_2
DAO
FAD_binding_3
GIDA
NAD_binding_8
Amino_oxidase
AlaDh_PNT_C
Thi4
Lys_Orn_oxgnase
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ANH36676
UniProt:
A0A1A9GF28
LinkDB
All DBs
Position
complement(233136..234539)
Genome browser
AA seq
467 aa
AA seq
DB search
MTHFDVLVLGAGPGGYVAAIRASQLGKSVAVVEEKYWGGVCLNVGCIPSKALLRNAEISH
LITHEKKTFGIEGDATMSFGPAHARSRKVAEASAKGVHYLMKKNKITEVDGWGTLTGTSD
GKHGIDVKDADGNVTSHTCDDLIIATGAQTRLVPGTSLSERVVTYEEQILTDELPGSIII
AGSGAIGVEFAYVMVNFGVKVTIVEFLDRMVPTEDPDVSKELLKQYKKLGVDVLLKTKVE
SIDDSGDQVKVTVSKDGEQQVLEADKVLQAIGFAPRIEGFGLDATGVELTERGAIAVDAR
GRTNVDGVWAIGDVTGKLMLAHTAESMGVIAAETIAGAETIEIDFDMIPRATFCQPQIAS
FGYTEEQAKEKGYDVKVAQFPFSANGKARGMGEGVGFVKIVADAEHHEIVGAHMIGPEVT
ELLPVLTLAQKWDLTADEVARNVFAHPTLSEAMKEAVEGIAGHMINL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgacccacttcgatgttctcgttcttggtgccggccccggtggctacgtcgcggcgatc
cgagcctcgcagctcggcaagtccgtcgcggtcgtggaggagaagtactggggaggtgtc
tgcctcaacgtcgggtgcatcccctccaaggcgctgctgcgcaatgcggagatctcgcac
ctcatcacccacgagaagaagaccttcggcatcgagggcgacgcgacgatgtcgttcggc
ccggcccacgcgcgcagccgcaaggtcgccgaggccagcgccaagggcgtgcactacctg
atgaagaagaacaagatcaccgaggtcgacggctggggcaccctgaccggcacctccgac
ggcaagcacggcatcgacgtcaaggacgccgacggcaacgtcacctcgcacacgtgcgac
gacctcatcatcgccaccggcgcgcagacccggctggtgcccggcacctcgctcagcgag
cgcgtggtgacctacgaggagcagatcctcaccgacgagctgcccggctcgatcatcatc
gccggctccggtgcgatcggcgtcgagttcgcctacgtgatggtgaacttcggtgtgaag
gtgaccatcgtcgaattcctcgaccggatggtgcccaccgaggacccggacgtgtccaag
gagctgctcaagcagtacaagaagctcggcgtcgacgtgctgctcaagaccaaggtcgag
agcatcgacgactccggcgaccaggtgaaggtcacggtcagcaaggacggcgagcagcag
gtcctcgaggccgacaaggtgctccaggcgatcggcttcgcgccccgcatcgagggcttc
ggcctcgacgcgaccggcgtcgagctcaccgagcgcggcgcgatcgcggtcgatgcgcgc
gggcgtaccaacgtcgacggcgtgtgggcgatcggtgacgtcaccggcaagctgatgctg
gcccacacggccgagtcgatgggtgtcatcgccgccgagaccatcgccggcgcggagacg
atcgagatcgacttcgacatgatcccgcgggccacgttctgccagccccagatcgcctcc
ttcggctacaccgaggagcaggcgaaggagaagggctacgacgtcaaggtcgcgcagttc
ccgttctcggccaacggcaaggcgcgcggcatgggtgagggtgtcggcttcgtcaagatc
gtcgccgacgccgagcaccacgagatcgtcggcgcccacatgatcggacccgaggtcacc
gagctgctgccggtgctcaccctggcccagaagtgggacctgaccgccgacgaggtggcc
cgcaacgtcttcgcgcacccgaccctgtcggaggcgatgaaggaggccgtcgagggcatc
gccggccacatgatcaacctctga
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