Nocardioides dokdonensis: I601_0386
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Entry
I601_0386 CDS
T04431
Symbol
hemY
Name
(GenBank) Protoporphyrinogen oxidase
KO
K00231
protoporphyrinogen/coproporphyrinogen III oxidase [EC:
1.3.3.4
1.3.3.15
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk00860
Porphyrin metabolism
ndk01100
Metabolic pathways
ndk01110
Biosynthesis of secondary metabolites
ndk01240
Biosynthesis of cofactors
Module
ndk_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
I601_0386 (hemY)
Enzymes [BR:
ndk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.3 With oxygen as acceptor
1.3.3.4 protoporphyrinogen oxidase
I601_0386 (hemY)
1.3.3.15 coproporphyrinogen III oxidase (coproporphyrin-forming)
I601_0386 (hemY)
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
Pyr_redox_2
Thi4
FAD_binding_3
Pyr_redox
Lycopene_cycl
GIDA
Pyr_redox_3
TrkA_N
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
ANH36838
UniProt:
A0A1A9GEZ1
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Position
complement(405896..407278)
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AA seq
460 aa
AA seq
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MHRDVVVVGGGIAGLTAAHELALAGRDVLLLEAAPRIGGKLRSHEVAGVVVDVGAEAMLN
RRPEGVDLARAVGLEVVHPAIVSSRLWTRGALRPLPRSLMGVPLDLEQLAASGILDAAAL
ARVREEPSLPPSEIGDDISVGDLVDARLGPAVTDLLVEPLLGGVYAGRARRISARAGVPQ
LVAMAERGSLLEQGAALAPAGATYAAPVFAGLTGGMGTLPEVLAAAVRAAGGEIRTDATV
RRLERDGAGFRLVVGPTTAPEPITAGAVVLATPPAPTARLLGEVAPLAGAALGAVETASM
AIVTLAFAIDDVPDLAATESSGFLVPPVDGRRIKASTFSFAKWAWVREAGVSSGVLHLRT
SLGRHGDEVLLQAPDERLVELSRADLREAVGLRSRPVDTHVQRWGGGLPQYAVGHLDLVA
RVRAAVAEVPGLAVCGAAYDGVGIPAVISSARTAVARVSG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgcacagggacgtcgtggtcgtggggggcgggatcgccggactgacggccgcccacgag
ctcgcgctggccggccgggacgtgctcctgctcgaggcggcgccccggatcggcggcaag
ctgcgctcgcacgaggtggcgggcgtggtcgtcgacgtcggcgccgaggcgatgctcaac
cggcgtcccgagggcgtcgacctggcccgtgccgtcgggctcgaggtggtgcacccggcg
atcgtctcgtcccggctgtggacccggggcgcgctgcgaccgctgccgcgctcgctgatg
ggggtgcccctcgacctcgaacagctcgccgcctcggggatcctcgacgccgccgccctg
gcccgggtgcgcgaggagccgtccctgccgccgagcgagatcggcgacgacatcagcgtc
ggcgacctcgtcgacgcccgactcggccccgccgtgaccgacctgctcgtggagccgctg
ctgggcggcgtgtacgccgggcgcgcccggcggatctccgcgcgcgcgggtgtcccgcag
ctggtcgccatggccgagcgcggctcgctgctcgagcagggcgcggccctggcgcccgcg
ggtgcgacgtacgccgccccggtgttcgcgggcctgaccggcgggatgggcacgctgccc
gaggtcctcgcggccgcggtgcgggccgccggaggtgagatccggaccgacgcgaccgtg
cgccgcctggagcgtgacggtgccggcttccggctggtcgtcgggcccaccacggccccg
gagccgatcaccgccggcgccgtggtgctggccacgccgccggcgcccaccgcgcggctg
ctcggcgaggtcgccccgctcgccggggccgcgctgggggccgtcgagaccgcgtcgatg
gcgatcgtgacgctcgcgttcgcgatcgacgacgtccccgacctggccgccaccgagagc
tcgggcttcctggtgccgccggtcgacggtcgccggatcaaggcctccaccttctcgttc
gccaagtgggcctgggtccgcgaggcgggcgtgtcctccggcgtgctgcacctgcgcacc
tcgctggggcgccacggcgacgaggtcctgctgcaggcgcccgacgagcggttggtcgag
ctctcgcgcgccgacctgcgcgaggccgtggggttgcggtcgcgtcccgtcgacacccac
gtgcagcgctggggcggcgggctgccgcagtacgccgtgggccacctcgacctggtcgcc
cgcgtgcgcgcggcggtggcggaggtgccggggctcgcggtgtgcggggcggcgtacgac
ggcgtgggcatccccgctgtgatcagctcggcacgcacggccgtcgcccgggtgagcggc
tga
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