Nocardioides dokdonensis: I601_0390
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Entry
I601_0390 CDS
T04431
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ndk
Nocardioides dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndk03016
]
I601_0390 (rnd)
Enzymes [BR:
ndk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
I601_0390 (rnd)
Transfer RNA biogenesis [BR:
ndk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
I601_0390 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ANH36842
UniProt:
A0A1A9GGS3
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All DBs
Position
410074..411414
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AA seq
446 aa
AA seq
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MAASLPPEVPEQPDDAAPTEEAAPEPAPLLTLRDPLPDVVDTPAGLEELCAAIATGTGPV
AIDAERASGHRYSNRAYLIQLRREGSGTHLLDPTPFDDLAPLQEAIGDAEWILHAATQDL
PCLRGEGLTPAALFDTELAGRLLGYPRVGLATLVETLIGRRMKKEHSAVDWSTRPLPQPW
LEYAALDVEVLVELRDLIAAELVATGKDGWAREEFDALRGFEAPVRVDAWRRTSGLHKVR
GRRALGAVKAMWELRDEIAEQRDVTPGRIVPDSAIAAAATAPTLPTERTELMALKGFHGR
GAERYSSRFAAVLREVAELPESELPARTPRSDGPPPPRAWADRDPVAARRLVLAREAMAA
LAEKHTMPVENLLTPDSLRRVLWAPPASRDPEQLASEVAAVLSGMGARPWQIGLVGPVVV
DAVLTADAEPLVDAEPLVDAEAPTED
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttccctcccgcccgaggtccccgagcagccggacgacgccgcccccaccgag
gaggcggctccggagccggccccgctgctgaccctgcgcgacccgcttcccgacgtggtc
gacacccccgccgggctggaggagctgtgtgctgccatcgcgacgggcaccggtccggtc
gcgatcgacgccgagcgcgcctcgggtcaccgctactccaaccgggcctacctgatccag
ctgcgccgcgagggctcgggcacccacctgctcgaccccacgccgttcgacgacctcgct
cccctgcaggaggccatcggggacgccgagtggatcctgcacgccgcgacccaggacctg
ccgtgcctgcgcggggagggcctgaccccggccgcgctcttcgacaccgagctggcgggg
cggctgctcggctacccccgcgtcggtctcgccacgctcgtggagacgttgatcgggcgc
cggatgaagaaggagcactcggccgtcgactggtccacgcgcccgctgccccagccgtgg
ctggagtacgccgccctcgatgtcgaggtcctcgtcgagctgcgcgacctcatcgccgcc
gagctggtggccaccggcaaggacgggtgggcccgtgaggagttcgacgccctgcgcggc
ttcgaggccccggtgcgcgtcgacgcgtggcggcgtacgtcgggcctgcacaaggtccgc
ggccgccgggccctgggtgcggtcaaggcgatgtgggagctgcgcgacgagatcgccgag
cagcgcgacgtgacaccgggacgcatcgtgcccgactccgcgatcgcggccgccgccacc
gcgcccacgctgccgaccgagcgcaccgagctgatggccctcaagggcttccacgggcgc
ggggcggagcgctactcctcccgcttcgcagcggtgctccgcgaggtcgccgagctgccc
gagtccgagctgccggcccgcaccccgcgcagcgacggcccgccgccgccgcgtgcctgg
gccgaccgcgacccggtcgccgcgcgccgtctcgtgctggcccgcgaggcgatggccgca
ctcgccgagaagcacacgatgccggtcgagaacctgctgaccccggactccctgcgccgg
gtgctgtgggccccgcccgcctcccgcgaccccgagcagctcgcctccgaggtggccgcc
gtgctgtccggcatgggtgcgcggccctggcagatcgggctcgtgggcccggtggtcgtc
gacgcggtcctcaccgccgacgccgagccgctcgtcgacgccgagccgctcgtcgacgcc
gaggcgccgaccgaggactaa
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