Nocardioides dokdonensis: I601_0444
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Entry
I601_0444 CDS
T04431
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I601_0444 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndk03021
]
I601_0444 (rpoA)
03400 DNA repair and recombination proteins [BR:
ndk03400
]
I601_0444 (rpoA)
Enzymes [BR:
ndk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I601_0444 (rpoA)
Transcription machinery [BR:
ndk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I601_0444 (rpoA)
DNA repair and recombination proteins [BR:
ndk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I601_0444 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ANH36896
UniProt:
A0A1A9GFR2
LinkDB
All DBs
Position
complement(466518..467534)
Genome browser
AA seq
338 aa
AA seq
DB search
MLIAQRPTLSEETVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIKIDNVL
HEFSTVEGVREDVTELILNLKGLVVSSEHDEPVTMYLRKSGAGDVTAADIAPPAGVEVHN
PELKIATLSDKGKLEMELVVERGRGYVSAVLNKGADNEIGRMPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVIDVETKPSIRPRDAIASAGKTLVELFGLARELNVEAEGIDIGPSPVD
EQLAADLALPVEDLQLTVRSYNCLKREGIHTVGELIGRSEQDLLDIRNFGAKSIDEVKAK
LVEMGLSLKDSAPGFDPQAALAAYGDDDDDAFVEDEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgccccaccctttcggaagagaccgtcgacgagttccgctcgcgg
ttcgtcatcgagccgctcgagcccggcttcggctacaccctcggcaactcgctgcggcgc
acgctgctcagctccatccccggcgcgtcggtcaccagcatcaagatcgacaacgtgctc
cacgagttctcgacggtcgagggcgtccgcgaggacgtcaccgagctcatcttgaacctc
aagggtctggtcgtctcctccgagcacgacgagccggtcacgatgtacctgcgcaagtcc
ggtgccggcgacgtcaccgccgccgacatcgcacccccggccggcgtcgaggtccacaac
cccgagctcaagatcgccaccctgtccgacaagggcaagctggagatggagctggtcgtc
gagcgtggccgcggctacgtctcggccgtgctcaacaagggcgccgacaacgagatcggc
cggatgcccgtcgactccatctacagccccgtgctgaaggtgacgtacaaggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgacaagctcgtcatcgacgtcgagaccaagccc
tcgatccggccccgcgacgccatcgcgtcggccggcaagacgctggtcgagctgttcggc
ctggcccgcgagctcaacgtcgaggccgagggcatcgacatcggtccctcgcccgtcgac
gagcagctcgccgccgacctggcgctgccggtcgaggacctgcagctgacggtgcggtcc
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcatcggtcgctcggag
caggacctgctcgacatccgcaacttcggcgcgaagtcgatcgacgaggtcaaggccaag
ctcgtcgagatgggcctctcgctgaaggacagcgctcccggcttcgacccgcaggcggcc
ctggctgcctacggcgacgacgacgacgacgcgttcgtcgaggacgagcagtactga
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