Nocardioides dokdonensis: I601_0565
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Entry
I601_0565 CDS
T04431
Symbol
oppD_1
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I601_0565 (oppD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ndk02000
]
I601_0565 (oppD_1)
Transporters [BR:
ndk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
I601_0565 (oppD_1)
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
ATP-synt_ab
DUF7146
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ANH37017
UniProt:
A0A1A9GFF2
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All DBs
Position
complement(578795..579838)
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AA seq
347 aa
AA seq
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MITENLLEVDDLRTTFQTPRGAVCAVDGVSLTLKPGETLGIVGESGSGKSVLGRTIMGLI
SNGPTTSVTGSVRIAGQDVHALSAKRRRKLWGPTVAMVFQDPMTSLNPVKKIGTHITEAL
RLHFSMGKTEARDRAIELLTQVGIPEPTRRMTQYPHELSGGMRQRVVIAMALCCGPDLLI
ADEPTTALDVTVQKQILDLLASLSQTLNMATILISHDLGAVEGRTDRVQVMYAGRVVESS
GTGTVFAEPGHPYAEALLASIPRMEDKPHTLLRAIDGTPPDMISPPPGCRFAPRCQYAQD
RCVQESPPLLDHVGSANPHLIACHYPLIVPAPGSAAAAARTLLEETR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaccgagaacctgctcgaggtcgacgacctccgcaccaccttccagaccccgcgc
ggcgccgtgtgcgccgtcgacggcgtctccctgaccctcaagccgggggagaccctcggc
atcgtgggcgagtccggctcgggcaagtccgtgctgggccgcaccatcatggggctgatc
tccaacggccccacgacctccgtgacaggttcggtgcgcatcgccggtcaggacgtgcat
gccctgagcgcgaagcgtcgccgcaagctgtggggaccgacggtggcgatggtcttccag
gacccgatgacgtcgctgaacccggtcaagaagatcggcacccacatcaccgaggcactg
cgcctgcacttctcgatgggcaagaccgaggcccgcgaccgcgccatcgagctgctcacg
caggtcggcatcccggagccgacccgacgcatgacgcagtacccccacgagctgtccggc
ggcatgcgccagcgcgtcgtgatcgcgatggcgctgtgctgcggaccggacctgctgatc
gccgacgagccgaccaccgcgctcgacgtgacggtgcagaagcagatcctcgacctcctg
gcctccctgagccagacgttgaacatggccacgatcctgatcagccacgacctcggggcc
gtcgagggacgcaccgaccgggtgcaggtcatgtacgccggtcgggtcgtggagtcgtcg
gggaccggcaccgtcttcgcggagcccggccacccgtacgccgaggcgctgctggcctcg
atcccgcgcatggaggacaagccgcacacgctgctgcgcgccatcgacggcacgcccccg
gacatgatctcgccgccgcccggctgccggttcgctccgcgctgccagtacgcccaggac
cgctgcgtccaggagtcgccgccgctgctggaccacgtcggctccgcgaacccgcacctg
atcgcctgtcactaccccctgatcgtccctgcgccaggctcggctgctgccgctgcgcgc
acgctgctcgaggagacccgctga
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