Nocardioides dokdonensis: I601_0815
Help
Entry
I601_0815 CDS
T04431
Symbol
lcfB_2
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk00061
Fatty acid biosynthesis
ndk00071
Fatty acid degradation
ndk01100
Metabolic pathways
ndk01212
Fatty acid metabolism
ndk02024
Quorum sensing
ndk04146
Peroxisome
Module
ndk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
I601_0815 (lcfB_2)
00071 Fatty acid degradation
I601_0815 (lcfB_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
I601_0815 (lcfB_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
I601_0815 (lcfB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ndk01004
]
I601_0815 (lcfB_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ndk04147
]
I601_0815 (lcfB_2)
Enzymes [BR:
ndk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
I601_0815 (lcfB_2)
Lipid biosynthesis proteins [BR:
ndk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
I601_0815 (lcfB_2)
Exosome [BR:
ndk04147
]
Exosomal proteins
Exosomal proteins of breast milk
I601_0815 (lcfB_2)
Exosomal proteins of breast cancer cells
I601_0815 (lcfB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ANH37261
UniProt:
A0A1A9GID1
LinkDB
All DBs
Position
complement(837057..838733)
Genome browser
AA seq
558 aa
AA seq
DB search
MDEGTTQERPGADADGGDERPGDLSDLVVVAASETPDKLALVEADGRSVTWVELEAEVAR
LAHGLSSVGVVAGYRVVMVLENTIEFVTTYLAVLRVHGVAVPVNPRSTVGEMVRILADSG
ARLVVADASALGTVRAAIAALEAAHAGTGATEEVAEHLPEDLLVRAAHPRLVVVGGDAAP
GEWSYAALRGVETTVEVPRVRDPERLAVLLYTSGTSGHPRAAMLSHRALLANIDQVGSVR
PAMMHGDDVVLGVLPLFHVYGLNAVLGSVLRHRAKLVLVRDHDPETILDVVDDEACSVLP
LAPPVFRHWRDDDSLAERLGPVRVILSGSAPLDPDAVARFTASTGLPVHQGYGLTEAAPV
VTSTLDGDDDPTPGSVGRALPGIEIRLVEESGQVPEPGDPGEIRIRGANLFSGYWPDGAD
GPDAEGWWSTGDVGLLDPRGELFLVDRVKELVIVSGFNVYPTEVEDVIREVAGVREAAVI
GVADQDTGEAVVAYVVAPETDPTEVAAEVRAWCEERLARFKVPSRIEVVDSLPVTGTGKV
RKGSLRAQERRRMLELLA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggcaccacgcaggagcgtcccggcgcggatgccgacggcggcgacgagcgg
cccggtgacctgagcgacctggtcgtggtggccgcctccgagacgccggacaagctggcg
ctcgtcgaggccgatggccgcagcgtcacctgggtcgagctcgaggccgaggtggcccgt
ctggcgcacggactctcctcggtcggtgtcgtggctggttaccgcgtcgtgatggtcctg
gagaacacgatcgagttcgtcaccacctacctcgccgtcctgcgcgtgcacggcgtggcg
gtccccgtgaacccccggtccacggtcggtgagatggtccgcatcctggcggactcgggg
gcccgcctcgtcgtggccgacgccagcgccctgggcacggtccgggccgcgatcgccgcc
ctcgaggccgcgcacgccggcaccggggcgaccgaggaggtggctgagcaccttccggaa
gacctgctggtccgcgcggcccatccgcgactcgtggtggtcggcggcgacgccgcgccg
ggggagtggtcctacgccgcgctgcgcggggtcgagaccacggtcgaggtgccccgggtc
cgcgaccccgagcggctcgcggtgctgctctacacctccggcacctccggccacccccgc
gccgcgatgctcagccaccgcgcgctgctggccaacatcgaccaggtcggcagcgtccgg
ccggcgatgatgcacggcgacgacgtggtcctcggggtgctccccctcttccacgtctac
gggctcaacgcggtgctcggcagcgtcctgcgccaccgggccaagctggtgctggtgcgt
gaccacgaccccgagacgatcctcgacgtcgtcgacgacgaggcgtgcagcgtgctgccg
ctggccccgccggtcttccggcactggcgcgacgacgacagcctcgccgagcggctcggg
ccggtgcgggtgatcctgtccggctccgctccgctcgacccggacgccgtggcgcgcttc
accgcctcgaccggtctgccggtccaccaggggtacgggctgaccgaggccgcccccgtg
gtcacgagcaccctggacggcgacgacgacccgacacccggatcggtgggtcgggcgctg
cccggcatcgagatccgtctcgtcgaggagtccgggcaggtgccggagcccggagacccc
ggtgagatccggatccgtggcgccaacctcttcagcggctactggcccgacggtgccgac
ggtcccgacgccgagggctggtggtcgaccggggacgtcgggctgctcgaccctcgcggc
gagctgttcctcgtcgaccgggtcaaggagctcgtcatcgtctcgggcttcaacgtctac
cccaccgaggtggaggacgtcatccgggaggtggcgggcgtgcgcgaggcggccgtcatc
ggcgtcgccgaccaggacaccggcgaggcggtggtcgcctacgtcgtggcgccggagacc
gacccgaccgaggtcgcggcggaggtccgtgcctggtgcgaggagcggctggcccgcttc
aaggtgcccagccggatcgaggtcgtcgactccctgcccgtcacggggaccggcaaggtc
cgcaagggatcgctgcgggcccaggagcgccgccgcatgctcgagctcctcgcatga
DBGET
integrated database retrieval system
