Nocardioides dokdonensis: I601_0903
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Entry
I601_0903 CDS
T04431
Symbol
lcfB_3
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk00061
Fatty acid biosynthesis
ndk00071
Fatty acid degradation
ndk01100
Metabolic pathways
ndk01212
Fatty acid metabolism
ndk02024
Quorum sensing
ndk04146
Peroxisome
Module
ndk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
I601_0903 (lcfB_3)
00071 Fatty acid degradation
I601_0903 (lcfB_3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
I601_0903 (lcfB_3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
I601_0903 (lcfB_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ndk01004
]
I601_0903 (lcfB_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ndk04147
]
I601_0903 (lcfB_3)
Enzymes [BR:
ndk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
I601_0903 (lcfB_3)
Lipid biosynthesis proteins [BR:
ndk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
I601_0903 (lcfB_3)
Exosome [BR:
ndk04147
]
Exosomal proteins
Exosomal proteins of breast milk
I601_0903 (lcfB_3)
Exosomal proteins of breast cancer cells
I601_0903 (lcfB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ANH37346
UniProt:
A0A1A9GH15
LinkDB
All DBs
Position
complement(926492..928063)
Genome browser
AA seq
523 aa
AA seq
DB search
MTSFNLASLLEGTTEQHADRDAIIFGDTRLTYAQVNGAANQIANLLVSRGIQPGDKVALS
CPNLPYFSLVYYGILKAGASVVPLNVLLKGREVAYHLADSDAKAFFCFQGTPELPIGAEG
HAGFSETDACEHFFMITADPAAESPIEGTETMGRAMAQQPPTFETVQTDEDDTAVILYTS
GTTGQPKGAELRHRNMRDNALAGADLFGASAERPDTYLCVLPLFHSFGQTVIQNGAFAFA
GTVVMLPRFEAQPALDLMLREEVTFFAGVPTMYWGLLGALTPETDVSALAANLRVAAAGG
SALPVEVHKDFQKKFGVTILEGYGLSETSPVASFSPYGEEPRVGSIGTPIPGVEMKLISP
EPGDWSDIEDTGPDAVGEIAIKGHNIMKGYYGRPDATDESIRDGWFRSGDLGRKDEDGWY
YIVDRSKDMIIRGGYNVYPREVEEVLMSHPDVSLAAVIGVPHDSHGEEIKAVLIMNEGST
TTEDEIVAWAKEQMAGYKYPRIVQFSKDLPMTATGKILKRELS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcttcaaccttgcgagcctgctcgagggcaccaccgagcagcacgccgaccgc
gacgccatcatcttcggcgacacccggctcacctacgcccaggtcaacggcgcagccaac
cagatcgccaacctgctggtctcgcgtgggatccagcccggcgacaaggtggccctgagc
tgcccgaacctgccctacttctcgctcgtgtactacggcatcctgaaggccggtgccagc
gtggtgccgctcaacgtgctgctcaagggccgcgaggtggcctaccacctggccgactcc
gacgcgaaggcgttcttctgcttccagggcacccccgagctgccgatcggcgccgagggc
cacgccggcttctccgaaaccgacgcgtgcgagcacttcttcatgatcaccgccgacccg
gccgcggagtcccccatcgagggcaccgagaccatgggccgcgcgatggcccagcagccg
cccacgttcgagacggtgcagaccgacgaggacgacaccgcggtcatcctgtacacctct
ggcaccaccggtcagcccaagggtgccgagctgcggcaccgcaacatgcgcgacaacgca
ctggccggagccgacctcttcggggccagcgccgagcggcccgacacctacctgtgcgtg
ctgccgctgttccactccttcggccagacggtcatccagaacggggcgttcgcgttcgcc
ggcaccgtggtgatgctgccccgcttcgaggcgcagcccgcgctcgacctgatgctgcgt
gaggaggtgaccttcttcgcgggtgtcccgaccatgtactgggggctgctgggtgcgctg
acgcccgagacggacgtctccgccctggccgccaacctgcgggtcgccgccgccggcggc
tcggcgctcccggtggaggtgcacaaggacttccagaagaagttcggcgtcacgatcctg
gagggctacggcctctccgagaccagccccgtcgcctcgttctcgccgtacggcgaggag
ccgcgggtcggctcgatcggcaccccgatccccggggtggagatgaagctgatcagcccc
gagccgggcgactggagcgacatcgaggacaccggccccgacgcggtcggcgagatcgcc
atcaagggccacaacatcatgaagggctactacgggcgccccgacgccaccgacgagtcc
atccgcgacggctggttccgctccggcgacctgggtcgcaaggacgaggacggctggtac
tacatcgtcgaccggtccaaggacatgatcatccggggcggctacaacgtgtacccgcgc
gaggtcgaggaggtgctgatgagccaccccgacgtctcgctcgccgccgtgatcggcgtg
ccgcacgactcgcacggcgaggagatcaaggccgtgctgatcatgaacgagggctccacc
accaccgaggacgagatcgtcgcgtgggccaaggagcagatggccggctacaagtacccc
cgcatcgtgcagttcagcaaggacctcccgatgacggcgaccggcaagatcctcaagcgc
gagctgtcgtga
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