Nocardioides dokdonensis: I601_0926
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Entry
I601_0926 CDS
T04431
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
I601_0926 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ndk01007
]
I601_0926 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndk03016
]
I601_0926 (lysS)
Enzymes [BR:
ndk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
I601_0926 (lysS)
Amino acid related enzymes [BR:
ndk01007
]
Aminoacyl-tRNA synthetase
Class I (A)
I601_0926 (lysS)
Transfer RNA biogenesis [BR:
ndk03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
I601_0926 (lysS)
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GFIT
Motif
Pfam:
tRNA-synt_1f
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-ProteinID:
ANH37369
UniProt:
A0A1A9GGB4
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Position
950697..952427
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AA seq
576 aa
AA seq
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MARGVDARGTDRPDPTDWVTRAADDAIRHAGGEDAVRAEGRTITCASGASPSGPVHLGNL
REFLTVHFVAEEIGRRGLPVRHLHSWDDYDRFRKVPAGVDPSWADHIGRPLSAVPDPWEC
HRSWAEHFKEPLVTSLRALGVEMEEVSQTEAYRRGDYVEQVLQAVEHRDRIESVLARYRT
KAAPVAESEQEAAALAESVTGDEEPAGAGDLARFPYKPYCRQCGRDTTTATAYDDDSTDL
AYSCTSCGFEGTTNLRTDHEGKLVWKVDWPMRWSVEGVDFEPGGVDHASPGSSYTVGKEV
VKAVYGARAPSFVGYSFVGAGGQVKMSSSRGGVPTAADALQILEAPVLRWLYVRRQPKQA
FNVDFGPEVVRLYDEWDSLTRKAADPAKRDAQVLSWERASSTAAAGTLATPAVVVPFRLL
SSVADVTAGSADMVSRIVGDVGHEHASVADLEPRLSRAMTWMSEYVPESERTVVRRGPDA
ARLAALSEDEELWLAQLLDRMPDHLELEATTSLIYGVPKLARGLGLDDAPTDEVKADQKA
FFRLLYELLVDAERGPRLPTLFLALGAEKVRRLLTP
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaggcgtcgacgcacgcggtaccgaccggcccgacccgaccgactgggtgacc
cgcgcagccgacgacgcgatccgccacgcgggcggcgaggacgccgtgcgcgccgagggc
cgcaccatcacctgcgcctccggcgccagcccgtcggggccggtgcacctgggcaacctg
cgcgagttcctgaccgtgcacttcgtggccgaggagatcggtcgacgcggcctcccggtg
cgccacctgcacagctgggacgactacgaccggttccgcaaggtgcctgccggcgtcgac
ccgtcctgggccgaccacatcggtcgtcccctctccgcggtccccgacccgtgggagtgc
cacaggtcgtgggccgagcacttcaaggagcccctggtcacctcgttgcgcgcgctgggc
gtggagatggaggaggtctcccagaccgaggcctaccgtcgcggcgactacgtcgagcag
gtgctgcaggccgtcgagcaccgcgaccgcatcgagagcgtgctggcgcgctaccgcacc
aaggccgccccggtcgcggagtccgagcaggaggccgccgcgctcgccgagtcggtgacc
ggcgacgaggagccggccggcgccggcgacctggcccgcttcccctacaagccctactgc
cgccagtgcggccgcgacaccaccaccgcgaccgcctacgacgacgacagcaccgacctg
gcctactcctgcacctcgtgcgggttcgagggcaccaccaacctgcgcaccgaccacgag
ggcaagctcgtgtggaaggtcgactggccgatgcgctggtcggtcgagggcgtcgacttc
gagccgggcggcgtcgaccacgccagccccgggtcgtcgtacaccgtcggcaaggaggtc
gtgaaggccgtgtacggcgcccgcgcgccgtccttcgtcggctactcgttcgtgggcgcc
ggcggccaggtgaagatgtcgtcctcacgcggcggcgtgcccaccgcggcagacgcgctg
cagatcctcgaggcgccggtgctgcgctggctctacgtgcgccgccagcccaagcaggcc
ttcaacgtcgacttcgggcccgaggtcgtgcggctctacgacgagtgggactccctgacc
cgcaaggccgccgacccggccaagcgggacgcccaggtgctgtcgtgggagcgtgcctcc
tcgacggcggccgccggcaccctggccaccccggccgtggtggtgccgttccggctgctc
tcgtcggtggccgacgtgaccgcgggcagcgccgacatggtgagccgcatcgtcggcgac
gtgggccacgagcacgcgtcggtggccgacctggagccgcgcctgagtcgcgcgatgacg
tggatgtcggagtacgtgcccgagtccgagcgcaccgtcgtgcgccgcgggcccgacgcg
gcccgcctggctgcgctgagcgaggacgaggagctctggctggcccagctgctggaccgg
atgccggaccacctcgagctcgaggcgaccacgtcgttgatctacggcgtgcccaagctg
gcccgggggctcggcctcgacgacgctcccaccgacgaggtgaaggccgaccagaaggcg
ttcttccggctgctctacgagctgctcgtggacgcggagcggggtccgcgcctgccgacg
ctgttcctcgcgctgggcgccgagaaggtgcgcaggctcctcacgccctga
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